RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 EDEM2Q9BV94 578 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 GPR174Q9BXC1 333 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 ERVMER34-1Q9H9K5 563 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 LUC7LQ9NQ29 371 aaKnown RBP9.32□□□□□ -0.92
SMC1A-203ENST00000428014 RABGEF1Q9UJ41 708 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 NUMA1Q14980 2115 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 CFAP69A5D8W1 941 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 ARHGAP42A6NI28 874 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 MEI4A8MW99 385 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 AKR1B15C9JRZ8 316 aaPredicted RBP9.31□□□□□ -0.92
SMC1A-203ENST00000428014 FAM72CH0Y354 149 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 CBX4O00257 560 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 VILLO15195 856 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 MID1O15344 667 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 CER1O95813 267 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 KRT7P08729 469 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 SKILP12757 684 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 ACSL1P33121 698 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 ARL4AP40617 200 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 SLC1A1P43005 524 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 STK19P49842 368 aaPredicted RBP9.31□□□□□ -0.92
SMC1A-203ENST00000428014 ADPRHP54922 357 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 TPI1P60174 286 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 DPYSQ14117 519 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 PDK2Q15119 407 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 CARD16Q5EG05 197 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 CCDC122Q5T0U0 273 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 FAM72AQ5TYM5 149 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 DCAF12L1Q5VU92 463 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 IL31Q6EBC2 164 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 FAM72DQ6L9T8 149 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 KIAA1161Q6NSJ0 714 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 RFX8Q6ZV50 586 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 TFAP2DQ7Z6R9 452 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 FAM72BQ86X60 149 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 MMAAQ8IVH4 418 aaKnown RBP9.31□□□□□ -0.92
SMC1A-203ENST00000428014 MAP7D3Q8IWC1 876 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 STK40Q8N2I9 435 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 PIP4K2CQ8TBX8 421 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 BIRC7Q96CA5 298 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 IFT43Q96FT9 208 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 CCDC42Q96M95 316 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 ZNF641Q96N77 438 aaPredicted RBP9.31□□□□□ -0.92
SMC1A-203ENST00000428014 PANX2Q96RD6 677 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 HEPHQ9BQS7 1158 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 ORAI3Q9BRQ5 295 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 ZNF670Q9BS34 389 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 SNRNP25Q9BV90 132 aaKnown RBP9.31□□□□□ -0.92
SMC1A-203ENST00000428014 THAP2Q9H0W7 228 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 NOL6Q9H6R4 1146 aaKnown RBP9.31□□□□□ -0.92
SMC1A-203ENST00000428014 TMEM74BQ9NUR3 256 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 IL36AQ9UHA7 158 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.31□□□□□ -0.92
SMC1A-203ENST00000428014 NCOR2Q9Y618 2525 aa9.31□□□□□ -0.92
SMC1A-203ENST00000428014 SPTBN2O15020 2390 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 A0A0A6YYK5 440 aaPredicted RBP9.3□□□□□ -0.92
SMC1A-203ENST00000428014 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.3□□□□□ -0.92
SMC1A-203ENST00000428014 TSPAN11A1L157 253 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 H3BRJ5 948 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 TSPAN6O43657 245 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 AKR1B10O60218 316 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 PCDHGA12O60330 932 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 SNAP91O60641 907 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 PRAMEF11O60813 436 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 PROSCO94903 275 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 MT-CO1P00395 513 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 IL1BP01584 269 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 IGHV4-34P06331 123 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 ENGP17813 658 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 CES1P23141 567 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 RENBPP51606 427 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 NEK3P51956 506 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 IRX4P78413 519 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 SLC25A11Q02978 314 aaKnown RBP9.3□□□□□ -0.92
SMC1A-203ENST00000428014 IL10RBQ08334 325 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 AGERQ15109 404 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 SETMARQ53H47 684 aaPredicted RBP9.3□□□□□ -0.92
SMC1A-203ENST00000428014 SLC45A4Q5BKX6 768 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 AGBL4Q5VU57 503 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 RWDD4Q6NW29 188 aaKnown RBP9.3□□□□□ -0.92
SMC1A-203ENST00000428014 SCYL2Q6P3W7 929 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 DPY19L3Q6ZPD9 716 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 Q6ZVU0 165 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 ERN2Q76MJ5 926 aaKnown RBP9.3□□□□□ -0.92
SMC1A-203ENST00000428014 DGLUCYQ7Z3D6 616 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 GLRX5Q86SX6 157 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 PIP4P1Q86T03 277 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 DCP2Q8IU60 420 aaKnown RBP9.3□□□□□ -0.92
SMC1A-203ENST00000428014 AADATQ8N5Z0 425 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 MFSD2AQ8NA29 543 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 DENND6BQ8NEG7 585 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 OR7D4Q8NG98 312 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 RFFLQ8WZ73 363 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 TSC1Q92574 1164 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 FAF2Q96CS3 445 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 GDAP1L1Q96MZ0 367 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 PSKH2Q96QS6 385 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.3□□□□□ -0.92
SMC1A-203ENST00000428014 NUP85Q9BW27 656 aa9.3□□□□□ -0.92
SMC1A-203ENST00000428014 KLC2Q9H0B6 622 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms