RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 FILIP1LQ4L180 1135 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 SETMARQ53H47 684 aaPredicted RBP18.76■□□□□ 0.59
PSPC1-202ENST00000427943 CARD16Q5EG05 197 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 EFHC2Q5JST6 749 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 DCUN1D2Q6PH85 259 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 ERN2Q76MJ5 926 aaKnown RBP18.76■□□□□ 0.59
PSPC1-202ENST00000427943 OR6K2Q8NGY2 324 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 PPP1R16AQ96I34 528 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 NAP1L5Q96NT1 182 aaPredicted RBP18.76■□□□□ 0.59
PSPC1-202ENST00000427943 FUCA2Q9BTY2 467 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 ZDHHC6Q9H6R6 413 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 MYO6Q9UM54 1294 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 DMTF1Q9Y222 760 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 SLC31A1O15431 190 aa18.75■□□□□ 0.59
PSPC1-202ENST00000427943 CREB3O43889 395 aa18.75■□□□□ 0.59
PSPC1-202ENST00000427943 EPHB2P29323 1055 aa18.75■□□□□ 0.59
PSPC1-202ENST00000427943 IQCB1Q15051 598 aa18.75■□□□□ 0.59
PSPC1-202ENST00000427943 INAVAQ3KP66 663 aa18.75■□□□□ 0.59
PSPC1-202ENST00000427943 CCDC157Q569K6 752 aa18.75■□□□□ 0.59
PSPC1-202ENST00000427943 SPATS2Q86XZ4 545 aaKnown RBP18.75■□□□□ 0.59
PSPC1-202ENST00000427943 ZNF354CQ86Y25 554 aa18.75■□□□□ 0.59
PSPC1-202ENST00000427943 RYBPQ8N488 228 aaPredicted RBP18.75■□□□□ 0.59
PSPC1-202ENST00000427943 MFSD2AQ8NA29 543 aa18.75■□□□□ 0.59
PSPC1-202ENST00000427943 HEPHQ9BQS7 1158 aa18.75■□□□□ 0.59
PSPC1-202ENST00000427943 CNPY3Q9BT09 278 aa18.75■□□□□ 0.59
PSPC1-202ENST00000427943 MAGEH1Q9H213 219 aa18.75■□□□□ 0.59
PSPC1-202ENST00000427943 FZD3Q9NPG1 666 aa18.75■□□□□ 0.59
PSPC1-202ENST00000427943 ZMIZ1Q9ULJ6 1067 aa18.75■□□□□ 0.59
PSPC1-202ENST00000427943 FZD10Q9ULW2 581 aa18.75■□□□□ 0.59
PSPC1-202ENST00000427943 ASPMQ8IZT6 3477 aa18.75■□□□□ 0.59
PSPC1-202ENST00000427943 A0A1B0GTH6 734 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 SYCE3A1L190 88 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 PRAMEF26H0Y7S4 382 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 PCDH8O95206 1070 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 ITGAVP06756 1048 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 L1CAMP32004 1257 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 GKP32189 559 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 NUDT1P36639 197 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 NEK3P51956 506 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 STAT4Q14765 748 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 POLD3Q15054 466 aaPredicted RBP18.74■□□□□ 0.59
PSPC1-202ENST00000427943 SEL1L3Q68CR1 1132 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 PARS2Q7L3T8 475 aaKnown RBP18.74■□□□□ 0.59
PSPC1-202ENST00000427943 TMC6Q7Z403 805 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 HORMAD1Q86X24 394 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 RTL3Q8N8U3 475 aaKnown RBP18.74■□□□□ 0.59
PSPC1-202ENST00000427943 HDAC8Q9BY41 377 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 HAUS4Q9H6D7 363 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 RETREG1Q9H6L5 497 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 NOL6Q9H6R4 1146 aaKnown RBP18.74■□□□□ 0.59
PSPC1-202ENST00000427943 GPATCH2LQ9NWQ4 482 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 FTSJ1Q9UET6 329 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 HPCAL4Q9UM19 191 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 ZFR2Q9UPR6 939 aaKnown RBP18.74■□□□□ 0.59
PSPC1-202ENST00000427943 LRRK1Q38SD2 2015 aa18.74■□□□□ 0.59
PSPC1-202ENST00000427943 WDFY3Q8IZQ1 3526 aa18.73■□□□□ 0.59
PSPC1-202ENST00000427943 A0A1W2PQC6 194 aa18.73■□□□□ 0.59
PSPC1-202ENST00000427943 TNFSF14O43557 240 aa18.73■□□□□ 0.59
PSPC1-202ENST00000427943 SERPINC1P01008 464 aa18.73■□□□□ 0.59
PSPC1-202ENST00000427943 ADRB3P13945 408 aa18.73■□□□□ 0.59
PSPC1-202ENST00000427943 ITGB7P26010 798 aa18.73■□□□□ 0.59
PSPC1-202ENST00000427943 EPHA8P29322 1005 aaPredicted RBP18.73■□□□□ 0.59
PSPC1-202ENST00000427943 ARRB1P49407 418 aaPredicted RBP18.73■□□□□ 0.59
PSPC1-202ENST00000427943 CCDC15Q0P6D6 951 aa18.73■□□□□ 0.59
PSPC1-202ENST00000427943 ZNF284Q2VY69 593 aa18.73■□□□□ 0.59
PSPC1-202ENST00000427943 SFMBT2Q5VUG0 894 aa18.73■□□□□ 0.59
PSPC1-202ENST00000427943 ZNF571Q7Z3V5 609 aaPredicted RBP18.73■□□□□ 0.59
PSPC1-202ENST00000427943 NETO2Q8NC67 525 aa18.73■□□□□ 0.59
PSPC1-202ENST00000427943 ZCCHC14Q8WYQ9 949 aaKnown RBP18.73■□□□□ 0.59
PSPC1-202ENST00000427943 KLC2Q9H0B6 622 aa18.73■□□□□ 0.59
PSPC1-202ENST00000427943 HECAQ9UBI9 543 aaPredicted RBP18.73■□□□□ 0.59
PSPC1-202ENST00000427943 ARID1BQ8NFD5 2236 aaPredicted RBP18.73■□□□□ 0.59
PSPC1-202ENST00000427943 FAM221BA6H8Z2 402 aa18.72■□□□□ 0.59
PSPC1-202ENST00000427943 BUB1O43683 1085 aa18.72■□□□□ 0.59
PSPC1-202ENST00000427943 DESP17661 470 aa18.72■□□□□ 0.59
PSPC1-202ENST00000427943 PSMA2P25787 234 aa18.72■□□□□ 0.59
PSPC1-202ENST00000427943 GEMIN4P57678 1058 aaKnown RBP18.72■□□□□ 0.59
PSPC1-202ENST00000427943 BNIP3Q12983 259 aa18.72■□□□□ 0.59
PSPC1-202ENST00000427943 MAMLD1Q13495 774 aa18.72■□□□□ 0.59
PSPC1-202ENST00000427943 ATXN7L2Q5T6C5 722 aaPredicted RBP18.72■□□□□ 0.59
PSPC1-202ENST00000427943 NEK5Q6P3R8 708 aa18.72■□□□□ 0.59
PSPC1-202ENST00000427943 FBXL19Q6PCT2 694 aa18.72■□□□□ 0.59
PSPC1-202ENST00000427943 IQCHQ86VS3 1027 aa18.72■□□□□ 0.59
PSPC1-202ENST00000427943 KDF1Q8NAX2 398 aaPredicted RBP18.72■□□□□ 0.59
PSPC1-202ENST00000427943 TMEM145Q8NBT3 493 aa18.72■□□□□ 0.59
PSPC1-202ENST00000427943 OR2AP1Q8NGE2 309 aa18.72■□□□□ 0.59
PSPC1-202ENST00000427943 SAP25Q8TEE9 199 aa18.72■□□□□ 0.59
PSPC1-202ENST00000427943 ISG20Q96AZ6 181 aaKnown RBP18.72■□□□□ 0.59
PSPC1-202ENST00000427943 VCPIP1Q96JH7 1222 aa18.72■□□□□ 0.59
PSPC1-202ENST00000427943 EPAS1Q99814 870 aa18.72■□□□□ 0.59
PSPC1-202ENST00000427943 TTYH3Q9C0H2 523 aa18.72■□□□□ 0.59
PSPC1-202ENST00000427943 CBX8Q9HC52 389 aa18.72■□□□□ 0.59
PSPC1-202ENST00000427943 TMEM8BA6NDV4 472 aa18.71■□□□□ 0.59
PSPC1-202ENST00000427943 KRIT1O00522 736 aa18.71■□□□□ 0.59
PSPC1-202ENST00000427943 DDX3XO00571 662 aaKnown RBP eCLIP18.71■□□□□ 0.599e-10■□□□□ 11.3
PSPC1-202ENST00000427943 YKT6O15498 198 aa18.71■□□□□ 0.59
PSPC1-202ENST00000427943 KDELR3O43731 214 aa18.71■□□□□ 0.59
PSPC1-202ENST00000427943 MAGEC1O60732 1142 aa18.71■□□□□ 0.59
PSPC1-202ENST00000427943 SDC3O75056 442 aa18.71■□□□□ 0.59
PSPC1-202ENST00000427943 TMCC1O94876 653 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms