RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 SQORQ9Y6N5 450 aa2.62□□□□□ -1.99
PTPRC-208ENST00000427110 A0A0A0MQY5 61 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 KIR2DS5A0A0G2JLQ3 304 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 TEX13CA0A0J9YWL9 993 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 GOLGA6L10A0A0M3HER8 536 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 C17orf113A0A1B0GUU1 675 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 TARSL2A2RTX5 802 aaKnown RBP2.61□□□□□ -1.99
PTPRC-208ENST00000427110 DDTLA6NHG4 134 aaPredicted RBP2.61□□□□□ -1.99
PTPRC-208ENST00000427110 C17orf100A8MU93 164 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 PROB1E7EW31 1015 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 KIR2DS3K7RE56 304 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 PRPF4O43172 522 aaKnown RBP eCLIP2.61□□□□□ -1.99
PTPRC-208ENST00000427110 SLC25A17O43808 307 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 ZC3H11AO75152 810 aaKnown RBP eCLIP2.61□□□□□ -1.99
PTPRC-208ENST00000427110 TMCC1O94876 653 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 TBX18O95935 607 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 CD4P01730 458 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 WNT1P04628 370 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 TMEM191BP0C7N4 346 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 CHRNB1P11230 501 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 TNFRSF1BP20333 461 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 SCP2P22307 547 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 POU1F1P28069 291 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 RFC1P35251 1148 aaPredicted RBP2.61□□□□□ -1.99
PTPRC-208ENST00000427110 SLC16A2P36021 539 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 ME1P48163 572 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 HARS2P49590 506 aaKnown RBP2.61□□□□□ -1.99
PTPRC-208ENST00000427110 CTCFP49711 727 aaPredicted RBP2.61□□□□□ -1.99
PTPRC-208ENST00000427110 CLCNKBP51801 687 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 FOXG1P55316 489 aaPredicted RBP2.61□□□□□ -1.99
PTPRC-208ENST00000427110 TMPRSS3P57727 454 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 KRTAP10-9P60411 292 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 MPP1Q00013 466 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 NEXNQ0ZGT2 675 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 LAMB3Q13751 1172 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 RUNX2Q13950 521 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 BAK1Q16611 211 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 TSTQ16762 297 aaKnown RBP2.61□□□□□ -1.99
PTPRC-208ENST00000427110 ME3Q16798 604 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 SMTNL2Q2TAL5 461 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 ODF3L2Q3SX64 289 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 LEXMQ3ZCV2 418 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 ZNF766Q5HY98 468 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 C6orf10Q5SRN2 563 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 FAM180BQ6P0A1 224 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 IL20RBQ6UXL0 311 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 ATF7IPQ6VMQ6 1270 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 DSTYKQ6XUX3 929 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 DEF8Q6ZN54 512 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 COLCA1Q6ZS62 124 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 R3HCC1LQ7Z5L2 792 aaKnown RBP2.61□□□□□ -1.99
PTPRC-208ENST00000427110 FAM217AQ8IXS0 508 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 CPXM2Q8N436 756 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 SLC25A41Q8N5S1 370 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 SLC44A5Q8NCS7 719 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 RASSF8Q8NHQ8 419 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 ZCCHC10Q8TBK6 192 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 ATOH1Q92858 354 aaPredicted RBP2.61□□□□□ -1.99
PTPRC-208ENST00000427110 VCPIP1Q96JH7 1222 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 CAMK1GQ96NX5 476 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 MAF1Q9H063 256 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 WDR26Q9H7D7 661 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 THSD1Q9NS62 852 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 KRT84Q9NSB2 600 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 OLA1Q9NTK5 396 aaKnown RBP2.61□□□□□ -1.99
PTPRC-208ENST00000427110 ZBTB40Q9NUA8 1239 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 POT1Q9NUX5 634 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 BABAM1Q9NWV8 329 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 PPP1R14DQ9NXH3 145 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 GRHL1Q9NZI5 618 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 MSRB1Q9NZV6 116 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 HCN3Q9P1Z3 774 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 NLKQ9UBE8 527 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 AASSQ9UDR5 926 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 FBXO40Q9UH90 709 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 HS3ST3B1Q9Y662 390 aa2.61□□□□□ -1.99
PTPRC-208ENST00000427110 TTBK1Q5TCY1 1321 aaPredicted RBP2.61□□□□□ -1.99
PTPRC-208ENST00000427110 TRBV5-3A0A0A0MS03 114 aa2.6□□□□□ -1.99
PTPRC-208ENST00000427110 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.6□□□□□ -1.99
PTPRC-208ENST00000427110 A0A1W2PPH5 198 aa2.6□□□□□ -1.99
PTPRC-208ENST00000427110 ARHGAP10A1A4S6 786 aa2.6□□□□□ -1.99
PTPRC-208ENST00000427110 PABPN1LA6NDY0 278 aaKnown RBP2.6□□□□□ -1.99
PTPRC-208ENST00000427110 GAGE10A6NGK3 116 aa2.6□□□□□ -1.99
PTPRC-208ENST00000427110 MYMKA6NI61 221 aa2.6□□□□□ -1.99
PTPRC-208ENST00000427110 CD8B2A6NJW9 211 aa2.6□□□□□ -1.99
PTPRC-208ENST00000427110 TEX22C9J3V5 150 aa2.6□□□□□ -1.99
PTPRC-208ENST00000427110 IKBKBO14920 756 aa2.6□□□□□ -1.99
PTPRC-208ENST00000427110 KCNAB3O43448 404 aa2.6□□□□□ -1.99
PTPRC-208ENST00000427110 KIF1CO43896 1103 aaKnown RBP2.6□□□□□ -1.99
PTPRC-208ENST00000427110 CNOT3O75175 753 aaKnown RBP2.6□□□□□ -1.99
PTPRC-208ENST00000427110 F9P00740 461 aa2.6□□□□□ -1.99
PTPRC-208ENST00000427110 SERPINC1P01008 464 aa2.6□□□□□ -1.99
PTPRC-208ENST00000427110 CRYABP02511 175 aaKnown RBP2.6□□□□□ -1.99
PTPRC-208ENST00000427110 URODP06132 367 aa2.6□□□□□ -1.99
PTPRC-208ENST00000427110 SNHG28P0DPA3 235 aa2.6□□□□□ -1.99
PTPRC-208ENST00000427110 SLC2A4P14672 509 aa2.6□□□□□ -1.99
PTPRC-208ENST00000427110 YWHAQP27348 245 aa2.6□□□□□ -1.99
PTPRC-208ENST00000427110 HTR6P50406 440 aa2.6□□□□□ -1.99
PTPRC-208ENST00000427110 CCR9P51686 369 aa2.6□□□□□ -1.99
PTPRC-208ENST00000427110 ARSFP54793 590 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms