RNA–Protein interactions for RNA: ENST00000425835.6

HDAC2-202, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-202ENST00000425835 IFIT1P09914 478 aaKnown RBP3.39□□□□□ -1.87
HDAC2-202ENST00000425835 GGT5P36269 586 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 ARSFP54793 590 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 CDH12P55289 794 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 TBL3Q12788 808 aaKnown RBP3.39□□□□□ -1.87
HDAC2-202ENST00000425835 TRPC3Q13507 836 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 PWP2Q15269 919 aaKnown RBP3.39□□□□□ -1.87
HDAC2-202ENST00000425835 TWIST1Q15672 202 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 RPE65Q16518 533 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 EDRF1Q3B7T1 1238 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 WDR45BQ5MNZ6 344 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 DCAF12L2Q5VW00 463 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 RETSATQ6NUM9 610 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 MOB3CQ70IA8 216 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 GLCCI1Q86VQ1 547 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 MON1AQ86VX9 555 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 LURAP1LQ8IV03 231 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 CADM3Q8N126 398 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 RFWD2Q8NHY2 731 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 GABPB2Q8TAK5 448 aaPredicted RBP3.39□□□□□ -1.87
HDAC2-202ENST00000425835 GDPD5Q8WTR4 605 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 OIT3Q8WWZ8 545 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 RAB40AQ8WXH6 277 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 SH3KBP1Q96B97 665 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 ZNF333Q96JL9 665 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 EIF2AK1Q9BQI3 630 aaKnown RBP3.39□□□□□ -1.87
HDAC2-202ENST00000425835 CLSTN3Q9BQT9 956 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 PHF7Q9BWX1 381 aaPredicted RBP3.39□□□□□ -1.87
HDAC2-202ENST00000425835 MRPL44Q9H9J2 332 aaKnown RBP3.39□□□□□ -1.87
HDAC2-202ENST00000425835 WDR6Q9NNW5 1121 aaKnown RBP3.39□□□□□ -1.87
HDAC2-202ENST00000425835 ATP8A2Q9NTI2 1148 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 TMEM160Q9NX00 188 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 IFT80Q9P2H3 777 aaPredicted RBP3.39□□□□□ -1.87
HDAC2-202ENST00000425835 CTNNAL1Q9UBT7 734 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 SEL1LQ9UBV2 794 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 CNOT7Q9UIV1 285 aaKnown RBP3.39□□□□□ -1.87
HDAC2-202ENST00000425835 LRRFIP2Q9Y608 721 aaKnown RBP3.39□□□□□ -1.87
HDAC2-202ENST00000425835 TTC3P53804 2025 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 CACNA1IQ9P0X4 2223 aa3.39□□□□□ -1.87
HDAC2-202ENST00000425835 A0A096LPK6 155 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 A0A1B0GVT2 93 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 FAM90A10PA6NDY2 464 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 GAGE12JA6NER3 117 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 FAM157AC9JC47 383 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 I6L893 689 aaPredicted RBP3.38□□□□□ -1.87
HDAC2-202ENST00000425835 LIASO43766 372 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 CREB3O43889 395 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 NTN1O95631 604 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 AGR2O95994 175 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 HOXA11P31270 313 aaPredicted RBP3.38□□□□□ -1.87
HDAC2-202ENST00000425835 PMS2P54278 862 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.38□□□□□ -1.87
HDAC2-202ENST00000425835 TRAF1Q13077 416 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 FHL1Q13642 323 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 CAPSQ13938 189 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 ATG9BQ674R7 924 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 CES5AQ6NT32 575 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 IL20RBQ6UXL0 311 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 HEATR4Q86WZ0 1026 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 MIGA1Q8NAN2 632 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 LSM14AQ8ND56 463 aaKnown RBP3.38□□□□□ -1.87
HDAC2-202ENST00000425835 TBC1D22AQ8WUA7 517 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 SLC35F5Q8WV83 523 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 HVCN1Q96D96 273 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 ELP4Q96EB1 424 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 GFM1Q96RP9 751 aaKnown RBP3.38□□□□□ -1.87
HDAC2-202ENST00000425835 MPHOSPH8Q99549 860 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 SF3B5Q9BWJ5 86 aaKnown RBP3.38□□□□□ -1.87
HDAC2-202ENST00000425835 NUF2Q9BZD4 464 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 EBF3Q9H4W6 596 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 KLHL31Q9H511 634 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 CATSPERBQ9H7T0 1116 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 IL1RAPL1Q9NZN1 696 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 PEMTQ9UBM1 199 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 FBXO40Q9UH90 709 aa3.38□□□□□ -1.87
HDAC2-202ENST00000425835 CCDC189A1A4V9 331 aa3.37□□□□□ -1.87
HDAC2-202ENST00000425835 TYW5A2RUC4 315 aaKnown RBP3.37□□□□□ -1.87
HDAC2-202ENST00000425835 PABPN1LA6NDY0 278 aaKnown RBP3.37□□□□□ -1.87
HDAC2-202ENST00000425835 EYA2O00167 538 aa3.37□□□□□ -1.87
HDAC2-202ENST00000425835 KIF1CO43896 1103 aaKnown RBP3.37□□□□□ -1.87
HDAC2-202ENST00000425835 ATP2C2O75185 946 aa3.37□□□□□ -1.87
HDAC2-202ENST00000425835 MMP3P08254 477 aa3.37□□□□□ -1.87
HDAC2-202ENST00000425835 SNHG28P0DPA3 235 aa3.37□□□□□ -1.87
HDAC2-202ENST00000425835 ENO3P13929 434 aaPredicted RBP3.37□□□□□ -1.87
HDAC2-202ENST00000425835 ARSBP15848 533 aa3.37□□□□□ -1.87
HDAC2-202ENST00000425835 XBP1P17861 261 aa3.37□□□□□ -1.87
HDAC2-202ENST00000425835 PSMC2P35998 433 aaKnown RBP3.37□□□□□ -1.87
HDAC2-202ENST00000425835 THPOP40225 353 aa3.37□□□□□ -1.87
HDAC2-202ENST00000425835 RFX5P48382 616 aaPredicted RBP3.37□□□□□ -1.87
HDAC2-202ENST00000425835 HTR6P50406 440 aa3.37□□□□□ -1.87
HDAC2-202ENST00000425835 CLCN5P51795 746 aa3.37□□□□□ -1.87
HDAC2-202ENST00000425835 CDH15P55291 814 aa3.37□□□□□ -1.87
HDAC2-202ENST00000425835 RPP30P78346 268 aaKnown RBP3.37□□□□□ -1.87
HDAC2-202ENST00000425835 TLE2Q04725 743 aa3.37□□□□□ -1.87
HDAC2-202ENST00000425835 SLC18A2Q05940 514 aa3.37□□□□□ -1.87
HDAC2-202ENST00000425835 GALNT2Q10471 571 aa3.37□□□□□ -1.87
HDAC2-202ENST00000425835 MAPK7Q13164 816 aa3.37□□□□□ -1.87
HDAC2-202ENST00000425835 RUNX2Q13950 521 aa3.37□□□□□ -1.87
HDAC2-202ENST00000425835 GPR68Q15743 365 aa3.37□□□□□ -1.87
HDAC2-202ENST00000425835 DUSP6Q16828 381 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms