RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 TSC1Q92574 1164 aa16.52■□□□□ 0.24
DDR1-234ENST00000424544 ARRDC3Q96B67 414 aa16.52■□□□□ 0.24
DDR1-234ENST00000424544 DNAJC7Q99615 494 aa16.52■□□□□ 0.24
DDR1-234ENST00000424544 ZYG11BQ9C0D3 744 aa16.52■□□□□ 0.24
DDR1-234ENST00000424544 OSBPL2Q9H1P3 480 aa16.52■□□□□ 0.24
DDR1-234ENST00000424544 PREBQ9HCU5 417 aa16.52■□□□□ 0.24
DDR1-234ENST00000424544 ZNHIT6Q9NWK9 470 aaKnown RBP16.52■□□□□ 0.24
DDR1-234ENST00000424544 PCDHGA1Q9Y5H4 931 aa16.52■□□□□ 0.24
DDR1-234ENST00000424544 URB1O60287 2271 aaKnown RBP16.52■□□□□ 0.23
DDR1-234ENST00000424544 PRAMEF26H0Y7S4 382 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 GOLGA8SH3BPF8 625 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 SRGAP2O75044 1071 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 C1SP09871 688 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 EPHA8P29322 1005 aaPredicted RBP16.51■□□□□ 0.23
DDR1-234ENST00000424544 PTPN9P43378 593 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 GSCP56915 257 aaPredicted RBP16.51■□□□□ 0.23
DDR1-234ENST00000424544 POM121L1PQ3SYA9 428 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 SLC45A4Q5BKX6 768 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 LINGO4Q6UY18 593 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 DPY19L3Q6ZPD9 716 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 TFAP2DQ7Z6R9 452 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 NLRP14Q86W24 1093 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 GALNT15Q8N3T1 639 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 MSANTD4Q8NCY6 345 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 RXFP2Q8WXD0 754 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 HDAC8Q9BY41 377 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 MAGEB5Q9BZ81 275 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 ABHD10Q9NUJ1 306 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 WASF2Q9Y6W5 498 aa16.51■□□□□ 0.23
DDR1-234ENST00000424544 TP53BP1Q12888 1972 aaPredicted RBP16.51■□□□□ 0.23
DDR1-234ENST00000424544 NBEAQ8NFP9 2946 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 TCRBV5S1A1TA0A578 114 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 FAM170AA1A519 330 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 MAT2AP31153 395 aaKnown RBP16.5■□□□□ 0.23
DDR1-234ENST00000424544 ARRB1P49407 418 aaPredicted RBP16.5■□□□□ 0.23
DDR1-234ENST00000424544 SERPINH1P50454 418 aaKnown RBP16.5■□□□□ 0.23
DDR1-234ENST00000424544 GNA12Q03113 381 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 CCDC15Q0P6D6 951 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 ZNF284Q2VY69 593 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 INAVAQ3KP66 663 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 RETSATQ6NUM9 610 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 TRIM72Q6ZMU5 477 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 STRADAQ7RTN6 431 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 MARCH9Q86YJ5 346 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 OXR1Q8N573 874 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 JOSD2Q8TAC2 188 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 SLC30A5Q8TAD4 765 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 PANX2Q96RD6 677 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 CEP44Q9C0F1 390 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 METTL5Q9NRN9 209 aaKnown RBP16.5■□□□□ 0.23
DDR1-234ENST00000424544 NDFIP2Q9NV92 336 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 OR12D3Q9UGF7 316 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 NEU3Q9UQ49 428 aa16.5■□□□□ 0.23
DDR1-234ENST00000424544 FARP1Q9Y4F1 1045 aaPredicted RBP16.5■□□□□ 0.23
DDR1-234ENST00000424544 BZW2Q9Y6E2 419 aaKnown RBP16.5■□□□□ 0.23
DDR1-234ENST00000424544 SMG1Q96Q15 3661 aaKnown RBP16.5■□□□□ 0.23
DDR1-234ENST00000424544 CACNA1GO43497 2377 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 A0A1W2PQU0 124 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 TRABD2BA6NFA1 517 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 FAM72CH0Y354 149 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 MAGEC1O60732 1142 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 PRNPP04156 253 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 SERPING1P05155 500 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 PTMAP06454 111 aaKnown RBP16.49■□□□□ 0.23
DDR1-234ENST00000424544 ITGAVP06756 1048 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 SKILP12757 684 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 RFC1P35251 1148 aaPredicted RBP16.49■□□□□ 0.23
DDR1-234ENST00000424544 PRKCIP41743 596 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 HDAC4P56524 1084 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 ATP11AP98196 1134 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 KLHL30Q0D2K2 578 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 STAT4Q14765 748 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 C15orf59Q2T9L4 293 aaPredicted RBP16.49■□□□□ 0.23
DDR1-234ENST00000424544 TMEM259Q4ZIN3 620 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 SETMARQ53H47 684 aaPredicted RBP16.49■□□□□ 0.23
DDR1-234ENST00000424544 ARSIQ5FYB1 569 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 FAM72AQ5TYM5 149 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 FAM72DQ6L9T8 149 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 C22orf39Q6P5X5 142 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 ERN2Q76MJ5 926 aaKnown RBP16.49■□□□□ 0.23
DDR1-234ENST00000424544 TMPRSS12Q86WS5 348 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 HORMAD1Q86X24 394 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 FAM72BQ86X60 149 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 PHF13Q86YI8 300 aaPredicted RBP16.49■□□□□ 0.23
DDR1-234ENST00000424544 SLC25A45Q8N413 288 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 ISG20Q96AZ6 181 aaKnown RBP16.49■□□□□ 0.23
DDR1-234ENST00000424544 CCDC86Q9H6F5 360 aaKnown RBP16.49■□□□□ 0.23
DDR1-234ENST00000424544 FTSJ1Q9UET6 329 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 ZFR2Q9UPR6 939 aaKnown RBP16.49■□□□□ 0.23
DDR1-234ENST00000424544 GPSM3Q9Y4H4 160 aa16.49■□□□□ 0.23
DDR1-234ENST00000424544 ITPR1Q14643 2758 aa16.48■□□□□ 0.23
DDR1-234ENST00000424544 CBX4O00257 560 aa16.48■□□□□ 0.23
DDR1-234ENST00000424544 ENC1O14682 589 aa16.48■□□□□ 0.23
DDR1-234ENST00000424544 BNIP3LO60238 219 aa16.48■□□□□ 0.23
DDR1-234ENST00000424544 LEFTY1O75610 366 aa16.48■□□□□ 0.23
DDR1-234ENST00000424544 CDK4P11802 303 aa16.48■□□□□ 0.23
DDR1-234ENST00000424544 CARD16Q5EG05 197 aa16.48■□□□□ 0.23
DDR1-234ENST00000424544 E4F1Q66K89 784 aaPredicted RBP16.48■□□□□ 0.23
DDR1-234ENST00000424544 WDR59Q6PJI9 974 aa16.48■□□□□ 0.23
DDR1-234ENST00000424544 DHRS13Q6UX07 377 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms