RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 MAPKAPK2P49137 400 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 RPL7AP62424 266 aaKnown RBP15.49■□□□□ 0.07
USB1-202ENST00000423271 PPP1R15BQ5SWA1 713 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 E4F1Q66K89 784 aaPredicted RBP15.49■□□□□ 0.07
USB1-202ENST00000423271 SARM1Q6SZW1 724 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 LEKR1Q6ZMV7 388 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 IRF2BP2Q7Z5L9 587 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 SPATS2Q86XZ4 545 aaKnown RBP15.49■□□□□ 0.07
USB1-202ENST00000423271 PYROXD2Q8N2H3 581 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 KDF1Q8NAX2 398 aaPredicted RBP15.49■□□□□ 0.07
USB1-202ENST00000423271 KLK6Q92876 244 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 ARHGEF2Q92974 986 aaKnown RBP15.49■□□□□ 0.07
USB1-202ENST00000423271 SKA1Q96BD8 255 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 MYOCQ99972 504 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 EDEM3Q9BZQ6 932 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 CEP44Q9C0F1 390 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 ZMIZ1Q9ULJ6 1067 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 DMXL2Q8TDJ6 3036 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 CHD6Q8TD26 2715 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 A0A1W2PQJ5 194 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 A0A1W2PQU0 124 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 DFNA5O60443 496 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 DKK1O94907 266 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 RECQLP46063 649 aaPredicted RBP15.48■□□□□ 0.07
USB1-202ENST00000423271 DNA2P51530 1060 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 CCNHP51946 323 aaPredicted RBP15.48■□□□□ 0.07
USB1-202ENST00000423271 ZNF143P52747 638 aaPredicted RBP15.48■□□□□ 0.07
USB1-202ENST00000423271 OGDHQ02218 1023 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 SCAPQ12770 1279 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 ASIC2Q16515 512 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 SETMARQ53H47 684 aaPredicted RBP15.48■□□□□ 0.07
USB1-202ENST00000423271 SLC45A4Q5BKX6 768 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 ACAD10Q6JQN1 1059 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 SCYL2Q6P3W7 929 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 ERN2Q76MJ5 926 aaKnown RBP15.48■□□□□ 0.07
USB1-202ENST00000423271 DNAAF5Q86Y56 855 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 MCOLN2Q8IZK6 566 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 PCDH20Q8N6Y1 951 aaKnown RBP15.48■□□□□ 0.07
USB1-202ENST00000423271 MFSD2AQ8NA29 543 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 OR6K2Q8NGY2 324 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 SAP25Q8TEE9 199 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 CPLX3Q8WVH0 158 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 ZCCHC14Q8WYQ9 949 aaKnown RBP15.48■□□□□ 0.07
USB1-202ENST00000423271 TM6SF2Q9BZW4 377 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 FZD3Q9NPG1 666 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 DYRK4Q9NR20 520 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 DMTF1Q9Y222 760 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 GOLGA4Q13439 2230 aaKnown RBP15.48■□□□□ 0.07
USB1-202ENST00000423271 PKD1L2Q7Z442 2459 aa15.48■□□□□ 0.07
USB1-202ENST00000423271 ARID1BQ8NFD5 2236 aaPredicted RBP15.47■□□□□ 0.07
USB1-202ENST00000423271 TMCO5BA8MYB1 307 aa15.47■□□□□ 0.07
USB1-202ENST00000423271 SLC31A1O15431 190 aa15.47■□□□□ 0.07
USB1-202ENST00000423271 ATMINO43313 823 aaPredicted RBP15.47■□□□□ 0.07
USB1-202ENST00000423271 GYPCP04921 128 aa15.47■□□□□ 0.07
USB1-202ENST00000423271 EPHA8P29322 1005 aaPredicted RBP15.47■□□□□ 0.07
USB1-202ENST00000423271 GKP32189 559 aa15.47■□□□□ 0.07
USB1-202ENST00000423271 NUDT1P36639 197 aa15.47■□□□□ 0.07
USB1-202ENST00000423271 SLC20A2Q08357 652 aa15.47■□□□□ 0.07
USB1-202ENST00000423271 CARD16Q5EG05 197 aa15.47■□□□□ 0.07
USB1-202ENST00000423271 SFMBT2Q5VUG0 894 aa15.47■□□□□ 0.07
USB1-202ENST00000423271 SLFN11Q7Z7L1 901 aa15.47■□□□□ 0.07
USB1-202ENST00000423271 HORMAD1Q86X24 394 aa15.47■□□□□ 0.07
USB1-202ENST00000423271 VSTM4Q8IW00 320 aa15.47■□□□□ 0.07
USB1-202ENST00000423271 HEPHQ9BQS7 1158 aa15.47■□□□□ 0.07
USB1-202ENST00000423271 ANP32EQ9BTT0 268 aa15.47■□□□□ 0.07
USB1-202ENST00000423271 HDAC8Q9BY41 377 aa15.47■□□□□ 0.07
USB1-202ENST00000423271 NOL6Q9H6R4 1146 aaKnown RBP15.47■□□□□ 0.07
USB1-202ENST00000423271 ZDHHC6Q9H6R6 413 aa15.47■□□□□ 0.07
USB1-202ENST00000423271 FTSJ1Q9UET6 329 aa15.47■□□□□ 0.07
USB1-202ENST00000423271 ZFR2Q9UPR6 939 aaKnown RBP15.47■□□□□ 0.07
USB1-202ENST00000423271 TRPM6Q9BX84 2022 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 COL5A1P20908 1838 aaPredicted RBP15.46■□□□□ 0.07
USB1-202ENST00000423271 TMEM8BA6NDV4 472 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 PRAMEF26H0Y7S4 382 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 TNFSF14O43557 240 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 RAMP2O60895 175 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 ITGAVP06756 1048 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 CCDC172P0C7W6 258 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 TNFAIP3P21580 790 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 ITGB7P26010 798 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 L1CAMP32004 1257 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 ETFBP38117 255 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 NEK3P51956 506 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 BNIP3Q12983 259 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 STAT4Q14765 748 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 ZNF284Q2VY69 593 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 INAVAQ3KP66 663 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 CCDC157Q569K6 752 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 EFHC2Q5JST6 749 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 SEL1L3Q68CR1 1132 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 SPECC1LQ69YQ0 1117 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 PARS2Q7L3T8 475 aaKnown RBP15.46■□□□□ 0.07
USB1-202ENST00000423271 IQCHQ86VS3 1027 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 MARCH9Q86YJ5 346 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 RTL3Q8N8U3 475 aaKnown RBP15.46■□□□□ 0.07
USB1-202ENST00000423271 TMEM145Q8NBT3 493 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 VOPP1Q96AW1 172 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 IQCDQ96DY2 449 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 PPP1R16AQ96I34 528 aa15.46■□□□□ 0.07
USB1-202ENST00000423271 CNPY3Q9BT09 278 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms