RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 NME7Q9Y5B8 376 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 HEATR9A2RTY3 570 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 FAM149AA5PLN7 773 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 ZBTB42B2RXF5 422 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 WNT10BO00744 389 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 HCRTO43612 131 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 TOMM70O94826 608 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 FUCA1P04066 466 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 TPH1P17752 444 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 PMS2P3Q13401 168 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 LRP8Q14114 963 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 DCAF6Q58WW2 860 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 GPR107Q5VW38 600 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 REP15Q6BDI9 236 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 TTC33Q6PID6 262 aaPredicted RBP16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 DCDC5Q6ZRR9 648 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 TBC1D15Q8TC07 691 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 CANT1Q8WVQ1 401 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 MUC3BQ9H195 1237 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 CXorf21Q9HAI6 301 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 CCDC167Q9P0B6 97 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 VTI1BQ9UEU0 232 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 COQ6Q9Y2Z9 468 aa16.89■□□□□ 0.3
NPC1L1-203ENST00000423141 A0A087WXM4 84 aa16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 FUOMA2VDF0 154 aa16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 TRIM43BA6NCK2 446 aa16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 HACD1B0YJ81 288 aa16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 AKAP10O43572 662 aa16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 ZBTB11O95625 1053 aaPredicted RBP16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 HNRNPLP14866 589 aaKnown RBP eCLIP16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 PPP1R3AQ16821 1122 aa16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 NANOGP8Q6NSW7 305 aa16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 CENPLQ8N0S6 344 aaPredicted RBP16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 CBR4Q8N4T8 237 aa16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 TRPC4APQ8TEL6 797 aa16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 SLC35F5Q8WV83 523 aa16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 RSPH1Q8WYR4 309 aa16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 SGF29Q96ES7 293 aa16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 VPS50Q96JG6 964 aa16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 NPLQ9BXD5 320 aaPredicted RBP16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 FZD8Q9H461 694 aa16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 ACAD9Q9H845 621 aa16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 VRTNQ9H8Y1 702 aa16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 XPR1Q9UBH6 696 aa16.89■□□□□ 0.29
NPC1L1-203ENST00000423141 SYNJ2BP-COX16A0A087WUM0 186 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 K7EPI3 171 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 GIPC1O14908 333 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 CABYRO75952 493 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 HSPA1AP0DMV8 641 aaKnown RBP16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 HSPA1BP0DMV9 641 aaKnown RBP16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 LCP1P13796 627 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 HMOX2P30519 316 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 RXRGP48443 463 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 ATP1A4Q13733 1029 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 MXD4Q14582 209 aaPredicted RBP16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 AARS2Q5JTZ9 985 aaKnown RBP16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 TSTD2Q5T7W7 516 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 LRRC8EQ6NSJ5 796 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 TMEM26Q6ZUK4 368 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 EEPD1Q7L9B9 569 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 CENPIQ92674 756 aaPredicted RBP16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 PLEKHA8Q96JA3 519 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 UHRF1Q96T88 793 aaPredicted RBP16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 MRPL45Q9BRJ2 306 aaKnown RBP16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 MCMBPQ9BTE3 642 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 UTP6Q9NYH9 597 aaKnown RBP16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 COX16Q9P0S2 106 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 TLK1Q9UKI8 766 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 CDH7Q9ULB5 785 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 PARP14Q460N5 1801 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 J3QRK9 145 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 OCM2P0CE71 109 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 OCMP0CE72 109 aaPredicted RBP16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 SLC35E2BP0CK96 405 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 UGT1A1P22309 533 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 UGT1A4P22310 534 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 UGT1A3P35503 534 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 UGT1A5P35504 534 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 ARL4AP40617 200 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 PTPN9P43378 593 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 PSMD8P48556 350 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 MAPK10P53779 464 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 BNIP3Q12983 259 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 BTG3Q14201 252 aaPredicted RBP16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 GRAMD4Q6IC98 578 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 PPP4R4Q6NUP7 873 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 RPS27LQ71UM5 84 aaKnown RBP16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 PELI3Q8N2H9 469 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 STYXQ8WUJ0 223 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 TANKQ92844 425 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 FBXL8Q96CD0 374 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 YIPF2Q9BWQ6 316 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 TNFRSF12AQ9NP84 129 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 GTF2IRD1Q9UHL9 959 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 LCTP09848 1927 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 TANC1Q9C0D5 1861 aa16.88■□□□□ 0.29
NPC1L1-203ENST00000423141 TRIM64CA6NLI5 447 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 TARM1B6A8C7 271 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 TIMM44O43615 452 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 ADAM23O75077 832 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms