RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 UNC93B1Q9H1C4 597 aa13.38□□□□□ -0.27
CALD1-205ENST00000422748 ADAMTS10Q9H324 1103 aa13.38□□□□□ -0.27
CALD1-205ENST00000422748 POLE4Q9NR33 117 aa13.38□□□□□ -0.27
CALD1-205ENST00000422748 SNX15Q9NRS6 342 aa13.38□□□□□ -0.27
CALD1-205ENST00000422748 GMPR2Q9P2T1 348 aaKnown RBP13.38□□□□□ -0.27
CALD1-205ENST00000422748 CDYLQ9Y232 598 aa13.38□□□□□ -0.27
CALD1-205ENST00000422748 RNF103-CHMP3A0A140T963 221 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 TRIM13O60858 407 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 SEC14L2O76054 403 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 TRUB2O95900 331 aaKnown RBP13.37□□□□□ -0.27
CALD1-205ENST00000422748 TBXAS1P24557 533 aaPredicted RBP13.37□□□□□ -0.27
CALD1-205ENST00000422748 ACOT2P49753 483 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 HLCSP50747 726 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 ATP6V0D1P61421 351 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 CLDN10P78369 228 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 STILQ15468 1287 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 PTPN20Q4JDL3 420 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 SEPT8Q92599 483 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 PEBP4Q96S96 227 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 RIT2Q99578 217 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 SOX17Q9H6I2 414 aaPredicted RBP13.37□□□□□ -0.27
CALD1-205ENST00000422748 RMND5AQ9H871 391 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 AKIP1Q9NQ31 210 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 GDAP2Q9NXN4 497 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 IFT80Q9P2H3 777 aaPredicted RBP13.37□□□□□ -0.27
CALD1-205ENST00000422748 USP18Q9UMW8 372 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 RAP2CQ9Y3L5 183 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 HES2Q9Y543 173 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 N6AMT1Q9Y5N5 214 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 TLL2Q9Y6L7 1015 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 B4GAT1O43505 415 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 ALDH1A2O94788 518 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 HLA-DOAP06340 250 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 PRKAA2P54646 552 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 NSUN2Q08J23 767 aaKnown RBP eCLIP13.37□□□□□ -0.27
CALD1-205ENST00000422748 AQP6Q13520 282 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 PLCL1Q15111 1095 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 XKR9Q5GH70 373 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 GLRA4Q5JXX5 417 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 IQSEC1Q6DN90 963 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 PLEKHG7Q6ZR37 379 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 SIX5Q8N196 739 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.37□□□□□ -0.27
CALD1-205ENST00000422748 USP33Q8TEY7 942 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 CDKL2Q92772 493 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 ATXN7L3BQ96GX2 97 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 CCDC17Q96LX7 622 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 BEGAINQ9BUH8 593 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 IMPG2Q9BZV3 1241 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 WDR12Q9GZL7 423 aaKnown RBP13.37□□□□□ -0.27
CALD1-205ENST00000422748 LHPPQ9H008 270 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 ZNF541Q9H0D2 1346 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 ATP13A3Q9H7F0 1226 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 MRPL40Q9NQ50 206 aaKnown RBP13.37□□□□□ -0.27
CALD1-205ENST00000422748 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.37□□□□□ -0.27
CALD1-205ENST00000422748 PIH1D1Q9NWS0 290 aaKnown RBP13.37□□□□□ -0.27
CALD1-205ENST00000422748 ZDHHC2Q9UIJ5 367 aa13.37□□□□□ -0.27
CALD1-205ENST00000422748 KPNA7A9QM74 516 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 TOR1BO14657 336 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 RGS13O14921 159 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 AURKAO14965 403 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 PIGNO95427 931 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 F7P08709 466 aaPredicted RBP13.36□□□□□ -0.27
CALD1-205ENST00000422748 MBL2P11226 248 aaPredicted RBP13.36□□□□□ -0.27
CALD1-205ENST00000422748 TFEBP19484 476 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 IRF9Q00978 393 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 TSPY1Q01534 308 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 FSTL1Q12841 308 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 PDK2Q15119 407 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 GADL1Q6ZQY3 521 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 KIAA2013Q8IYS2 634 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 ZFP90Q8TF47 636 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 RNF38Q9H0F5 515 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 ARMC1Q9NVT9 282 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 AURKCQ9UQB9 309 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 SCN4AP35499 1836 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 F5H423 210 aaPredicted RBP13.36□□□□□ -0.27
CALD1-205ENST00000422748 TPST1O60507 370 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 ITGB5P18084 799 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 HDCP19113 662 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 POLR2EP19388 210 aaKnown RBP13.36□□□□□ -0.27
CALD1-205ENST00000422748 GARTP22102 1010 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 EEF1B2P24534 225 aaKnown RBP13.36□□□□□ -0.27
CALD1-205ENST00000422748 CLCQ05315 142 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 PPIL2Q13356 520 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 RAB6CQ53S08 254 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 ARL13AQ5H913 290 aaPredicted RBP13.36□□□□□ -0.27
CALD1-205ENST00000422748 STEAP4Q687X5 459 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 UBE2Q1Q7Z7E8 422 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 SLC22A16Q86VW1 577 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 PARP8Q8N3A8 854 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 PLD5Q8N7P1 536 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 ANKK1Q8NFD2 765 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 TFAP2BQ92481 460 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 IL12RB2Q99665 862 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 COA1Q9GZY4 146 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 RAB6CQ9H0N0 254 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 PKD2L2Q9NZM6 624 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 CD300AQ9UGN4 299 aa13.36□□□□□ -0.27
CALD1-205ENST00000422748 AP4E1Q9UPM8 1137 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms