RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 MAPKAPK2P49137 400 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 ZNF143P52747 638 aaPredicted RBP11.26□□□□□ -0.61
SSBP3-206ENST00000420121 SLC20A2Q08357 652 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 SUZ12Q15022 739 aaKnown RBP11.26□□□□□ -0.61
SSBP3-206ENST00000420121 IQCB1Q15051 598 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 ZNF284Q2VY69 593 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 ARL13BQ3SXY8 428 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 SFMBT2Q5VUG0 894 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 ACAD10Q6JQN1 1059 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 RETSATQ6NUM9 610 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 ERN2Q76MJ5 926 aaKnown RBP11.26□□□□□ -0.61
SSBP3-206ENST00000420121 PRPF39Q86UA1 669 aaKnown RBP11.26□□□□□ -0.61
SSBP3-206ENST00000420121 MCOLN2Q8IZK6 566 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 PCDH20Q8N6Y1 951 aaKnown RBP11.26□□□□□ -0.61
SSBP3-206ENST00000420121 GRIN3AQ8TCU5 1115 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 SLC39A7Q92504 469 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 NAP1L5Q96NT1 182 aaPredicted RBP11.26□□□□□ -0.61
SSBP3-206ENST00000420121 CDC6Q99741 560 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 SELENOOQ9BVL4 669 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 HDAC8Q9BY41 377 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 TTYH3Q9C0H2 523 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 RETREG1Q9H6L5 497 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 CAAP1Q9H8G2 361 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 ERVMER34-1Q9H9K5 563 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 IL36AQ9UHA7 158 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 DNAI1Q9UI46 699 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 DMTF1Q9Y222 760 aa11.26□□□□□ -0.61
SSBP3-206ENST00000420121 APOBEC2Q9Y235 224 aaKnown RBP11.26□□□□□ -0.61
SSBP3-206ENST00000420121 NBEAQ8NFP9 2946 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 APC2O95996 2303 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 A0A1W2PQU0 124 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 TMEM8BA6NDV4 472 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 TAF4O00268 1085 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 SPINT1O43278 529 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 TNFSF14O43557 240 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 PRLRP16471 622 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 FERP16591 822 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 L1CAMP32004 1257 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 NUDT1P36639 197 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 RXRGP48443 463 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 CCNHP51946 323 aaPredicted RBP11.25□□□□□ -0.61
SSBP3-206ENST00000420121 BNIP3Q12983 259 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 PDAP1Q13442 181 aaKnown RBP11.25□□□□□ -0.61
SSBP3-206ENST00000420121 FGL2Q14314 439 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 TMEM259Q4ZIN3 620 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 CARD16Q5EG05 197 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 RWDD4Q6NW29 188 aaKnown RBP11.25□□□□□ -0.61
SSBP3-206ENST00000420121 NEK5Q6P3R8 708 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 DNAJC24Q6P3W2 148 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 CCNI2Q6ZMN8 369 aaPredicted RBP11.25□□□□□ -0.61
SSBP3-206ENST00000420121 TMPRSS7Q7RTY8 843 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 SLFN11Q7Z7L1 901 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 IQCHQ86VS3 1027 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 HORMAD1Q86X24 394 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 DNAAF5Q86Y56 855 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 MARCH9Q86YJ5 346 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 PLPP6Q8IY26 295 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 ARFGAP1Q8N6T3 406 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 KLK6Q92876 244 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 ISG20Q96AZ6 181 aaKnown RBP11.25□□□□□ -0.61
SSBP3-206ENST00000420121 TBC1D31Q96DN5 1066 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 CCDC114Q96M63 670 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 MCEEQ96PE7 176 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 HEPHQ9BQS7 1158 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 KLC2Q9H0B6 622 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 MAGEH1Q9H213 219 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 GDF3Q9NR23 364 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 SEPT11Q9NVA2 429 aaKnown RBP11.25□□□□□ -0.61
SSBP3-206ENST00000420121 FZD10Q9ULW2 581 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 MYO6Q9UM54 1294 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 CELSR3Q9NYQ7 3312 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 FAM208BQ5VWN6 2430 aa11.25□□□□□ -0.61
SSBP3-206ENST00000420121 KNTC1P50748 2209 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 ACACAQ13085 2346 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 COL27A1Q8IZC6 1860 aaPredicted RBP11.24□□□□□ -0.61
SSBP3-206ENST00000420121 A0A1B0GTH6 734 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 LRRC53A6NM62 1247 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 WASH4PA8MWX3 477 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 PRAMEF26H0Y7S4 382 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 ADRB3P13945 408 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 ITGB7P26010 798 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 GKP32189 559 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 OVGP1Q12889 678 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 SETMARQ53H47 684 aaPredicted RBP11.24□□□□□ -0.61
SSBP3-206ENST00000420121 SEL1L3Q68CR1 1132 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 PLEKHA7Q6IQ23 1121 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 CAVIN1Q6NZI2 390 aaKnown RBP11.24□□□□□ -0.61
SSBP3-206ENST00000420121 LEKR1Q6ZMV7 388 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 GCNT7Q6ZNI0 430 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 CYP4V2Q6ZWL3 525 aaPredicted RBP11.24□□□□□ -0.61
SSBP3-206ENST00000420121 PARS2Q7L3T8 475 aaKnown RBP11.24□□□□□ -0.61
SSBP3-206ENST00000420121 RTL3Q8N8U3 475 aaKnown RBP11.24□□□□□ -0.61
SSBP3-206ENST00000420121 ZCCHC14Q8WYQ9 949 aaKnown RBP11.24□□□□□ -0.61
SSBP3-206ENST00000420121 SKA1Q96BD8 255 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 MYOCQ99972 504 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 CNPY3Q9BT09 278 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 TM6SF2Q9BZW4 377 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 FZD3Q9NPG1 666 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 GPR27Q9NS67 375 aa11.24□□□□□ -0.61
SSBP3-206ENST00000420121 FADS3Q9Y5Q0 445 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms