RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 PLCD3Q8N3E9 789 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 KDM1BQ8NB78 822 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 LRRN4Q8WUT4 740 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 AGAP3Q96P47 875 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 XPO6Q96QU8 1125 aaKnown RBP14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 HINFPQ9BQA5 517 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 GORASP1Q9BQQ3 440 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 APOL5Q9BWW9 433 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 POLR1EQ9GZS1 481 aaKnown RBP14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 ARNT2Q9HBZ2 717 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 RSPH14Q9UHP6 348 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 VPS51Q9UID3 782 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 VPS28Q9UK41 221 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 INTS6Q9UL03 887 aaKnown RBP14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 CLEC4EQ9ULY5 219 aa14.5□□□□□ -0.09
SHMT1P1-201ENST00000419974 NEDD8-MDP1E9PL57 170 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 MAP2K7O14733 419 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 TIMM44O43615 452 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 HLA-DQB2P05538 268 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 APRTP07741 180 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 FAM153BP0C7A2 387 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 ADH5P11766 374 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 PSMB4P28070 264 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 GEMP55040 296 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 ARL4CP56559 192 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 MPP3Q13368 585 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 HTR4Q13639 388 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 HIF1AQ16665 826 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 GAB4Q2WGN9 574 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 FAM153CQ494X1 144 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 PREPLQ4J6C6 727 aaPredicted RBP14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 TMEM31Q5JXX7 168 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 ANKRD22Q5VYY1 191 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 CENPUQ71F23 418 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 LINC00523Q86TU6 105 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 AHI1Q8N157 1196 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 PDIK1LQ8N165 341 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 ARRDC2Q8TBH0 407 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 ASIC4Q96FT7 647 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 SERPINB12Q96P63 405 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 PHF7Q9BWX1 381 aaPredicted RBP14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 CEP44Q9C0F1 390 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 ECT2Q9H8V3 914 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 LRRC40Q9H9A6 602 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 SEPT10Q9P0V9 454 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 FAM153AQ9UHL3 310 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 CDH22Q9UJ99 828 aa14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 NYNRINQ9P2P1 1898 aaKnown RBP14.49□□□□□ -0.09
SHMT1P1-201ENST00000419974 TCRBV7S3A2A0A539 114 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 LOC730098B7Z3J9 87 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 SCAMP3O14828 347 aaKnown RBP14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 DCXO43602 365 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 PABPC1P11940 636 aaKnown RBP14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 NFKB1P19838 968 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 GBP2P32456 591 aaPredicted RBP14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 CD70P32970 193 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 ADRA1AP35348 466 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 MAPK8P45983 427 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 SERPINH1P50454 418 aaKnown RBP14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 RUNX3Q13761 415 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 EIF4HQ15056 248 aaKnown RBP14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 CYTH1Q15438 398 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 PITRM1Q5JRX3 1037 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 NAPEPLDQ6IQ20 393 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 CYS1Q717R9 158 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 ZNF534Q76KX8 674 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 HDXQ7Z353 690 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 ADIPOR2Q86V24 386 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 CAND1Q86VP6 1230 aaKnown RBP14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 CCNJLQ8IV13 435 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 PGBD5Q8N414 524 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 CPA6Q8N4T0 437 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 FGF14Q92915 247 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 RBM15Q96T37 977 aaKnown RBP eCLIP14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 LRFN3Q9BTN0 628 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 SPON2Q9BUD6 331 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 MLPHQ9BV36 600 aaPredicted RBP14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 FUT8Q9BYC5 575 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 PABPC3Q9H361 631 aaKnown RBP14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 C11orf16Q9NQ32 467 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 HPS4Q9NQG7 708 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 GGA2Q9UJY4 613 aa14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 ARIH1Q9Y4X5 557 aaPredicted RBP14.48□□□□□ -0.09
SHMT1P1-201ENST00000419974 NUP205Q92621 2012 aa14.47□□□□□ -0.09
SHMT1P1-201ENST00000419974 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.47□□□□□ -0.09
SHMT1P1-201ENST00000419974 E7EVH7 732 aa14.47□□□□□ -0.09
SHMT1P1-201ENST00000419974 CBX4O00257 560 aa14.47□□□□□ -0.09
SHMT1P1-201ENST00000419974 ASLP04424 464 aa14.47□□□□□ -0.09
SHMT1P1-201ENST00000419974 MMP2P08253 660 aa14.47□□□□□ -0.09
SHMT1P1-201ENST00000419974 COL9A1P20849 921 aa14.47□□□□□ -0.09
SHMT1P1-201ENST00000419974 DHX9Q08211 1270 aaKnown RBP14.47□□□□□ -0.09
SHMT1P1-201ENST00000419974 ZNF235Q14590 738 aa14.47□□□□□ -0.09
SHMT1P1-201ENST00000419974 DNAJC21Q5F1R6 531 aaKnown RBP14.47□□□□□ -0.09
SHMT1P1-201ENST00000419974 ASTLQ6HA08 431 aaPredicted RBP14.47□□□□□ -0.09
SHMT1P1-201ENST00000419974 KDELC1Q6UW63 502 aa14.47□□□□□ -0.09
SHMT1P1-201ENST00000419974 PARM1Q6UWI2 310 aa14.47□□□□□ -0.09
SHMT1P1-201ENST00000419974 RANBP10Q6VN20 620 aa14.47□□□□□ -0.09
SHMT1P1-201ENST00000419974 PRPF39Q86UA1 669 aaKnown RBP14.47□□□□□ -0.09
SHMT1P1-201ENST00000419974 SUGP1Q8IWZ8 645 aaKnown RBP14.47□□□□□ -0.09
SHMT1P1-201ENST00000419974 APCDD1Q8J025 514 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms