RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 C12orf65Q9H3J6 166 aaKnown RBP9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 UXTQ9UBK9 157 aaPredicted RBP9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 EMCNQ9ULC0 261 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 RIMKLBQ9ULI2 386 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 USH1CQ9Y6N9 552 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 LOC285095A0A1B0GVY8 99 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 ILVBLA1L0T0 632 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 TRIM43BA6NCK2 446 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 ATP9BO43861 1147 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 PLIN3O60664 434 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 SNNO75324 88 aaPredicted RBP9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 CLDN11O75508 207 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 STC2O76061 302 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 PROCP04070 461 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 PRKCGP05129 697 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 MPOP05164 745 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 LINC00271P0C7V0 271 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 TROVE2P10155 538 aaKnown RBP eCLIP9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 ITGB8P26012 769 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 ARNTP27540 789 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 SKIV2L2P42285 1042 aaKnown RBP9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 SCTRP47872 440 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 ARCN1P48444 511 aaKnown RBP9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 HARS2P49590 506 aaKnown RBP9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 HTRA4P83105 476 aaPredicted RBP9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 OCRLQ01968 901 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 SLC10A7Q0GE19 358 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 PLD1Q13393 1074 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 IHHQ14623 411 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 VEPH1Q14D04 833 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 POLD3Q15054 466 aaPredicted RBP9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 HSP90AA5PQ58FG0 334 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 RABGAP1LQ5R372 815 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 RNF187Q5TA31 235 aaPredicted RBP9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 FYB2Q5VWT5 728 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 CIR1Q86X95 450 aaPredicted RBP9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 FAM217AQ8IXS0 508 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 LGI2Q8N0V4 545 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 DCLK2Q8N568 766 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 CCDC63Q8NA47 563 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 NSMCE1Q8WV22 266 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 PPM1EQ8WY54 764 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 PEX13Q92968 403 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 PSMG2Q969U7 264 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 TRIM43Q96BQ3 446 aaPredicted RBP9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 ZFRQ96KR1 1074 aaKnown RBP9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 ZNF512Q96ME7 567 aaPredicted RBP9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 PRICKLE1Q96MT3 831 aaPredicted RBP9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 TSSK1BQ9BXA7 367 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 ZBP1Q9H171 429 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 RHOJQ9H4E5 214 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 NT5MQ9NPB1 228 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 CHRAC1Q9NRG0 131 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 UBP1Q9NZI7 540 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 TXNDC16Q9P2K2 825 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 DCDC2Q9UHG0 476 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 MAGED2Q9UNF1 606 aaPredicted RBP9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 ASB3Q9Y575 518 aa9.18□□□□□ -0.94
LINCMD1-201ENST00000418518 DOCK6Q96HP0 2047 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 A0A1B0GVM2 712 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 HEATR9A2RTY3 570 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 TCAF2A6NFQ2 919 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 ANKRD65E5RJM6 399 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 DCTN3O75935 186 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 NEBLO76041 1014 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 UBOX5O94941 541 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 EPOP01588 193 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 F11P03951 625 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 KLKB1P03952 638 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 HMBSP08397 361 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 ATXN1LP0C7T5 689 aaKnown RBP9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 CSF2RAP15509 400 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 TPH1P17752 444 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 PAMP19021 973 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 BGNP21810 368 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 PSMA3P25788 255 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 OR1E1P30953 314 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 ACVRL1P37023 503 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 ALDH1A3P47895 512 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 LIG3P49916 1009 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 GNA12Q03113 381 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 ACVR1Q04771 509 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 ILF2Q12905 390 aaKnown RBP9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 BNIP1Q12981 228 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 RFTN1Q14699 578 aaPredicted RBP9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 LBRQ14739 615 aaKnown RBP9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 UGP2Q16851 508 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 ADGRF1Q5T601 910 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 N4BP2L1Q5TBK1 243 aaPredicted RBP9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 FAM91A1Q658Y4 838 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 ATG16L1Q676U5 607 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 FSTL4Q6MZW2 842 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 ZNF783Q6ZMS7 281 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 KIAA0408Q6ZU52 694 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 STRA8Q7Z7C7 330 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 TMEM150AQ86TG1 271 aa9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 SETD3Q86TU7 594 aaPredicted RBP9.17□□□□□ -0.94
LINCMD1-201ENST00000418518 ZC3HC1Q86WB0 502 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms