RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ARNTP27540 789 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 CHRNA4P43681 627 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 CSE1LP55060 971 aaKnown RBP14.69□□□□□ -0.06
HDAC9-208ENST00000417496 CNGA3Q16281 694 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 NOMO2Q5JPE7 1267 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 TSTD2Q5T7W7 516 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 TAC4Q86UU9 113 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 RNF135Q8IUD6 432 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 ICA1LQ8NDH6 482 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 BRI3BPQ8WY22 251 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 MS4A4AQ96JQ5 239 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 EPAS1Q99814 870 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 SPATA16Q9BXB7 569 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 RHOJQ9H4E5 214 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 COPS7BQ9H9Q2 264 aaPredicted RBP14.69□□□□□ -0.06
HDAC9-208ENST00000417496 CNGB3Q9NQW8 809 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 A0A1B0GVG6 124 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 ERI2A8K979 691 aaKnown RBP14.68□□□□□ -0.06
HDAC9-208ENST00000417496 C9IYK1 514 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 HHLA1C9JL84 531 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 PMPCBO75439 489 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 DDHD2O94830 711 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 PRDX6P30041 224 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 AXLP30530 894 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 PGFP49763 221 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 GJA9P57773 515 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 ADAM17P78536 824 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 CDC42EP1Q00587 391 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 FLOT2Q14254 428 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 LDLRAD1Q5T700 205 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 NAPEPLDQ6IQ20 393 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 ZNF467Q7Z7K2 595 aaPredicted RBP14.68□□□□□ -0.06
HDAC9-208ENST00000417496 TLK2Q86UE8 772 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 SATL1Q86VE3 508 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 PQLC1Q8N2U9 271 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 SCAMP5Q8TAC9 235 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 HASPINQ8TF76 798 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 DPF3Q92784 378 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 TMA16Q96EY4 203 aaKnown RBP14.68□□□□□ -0.06
HDAC9-208ENST00000417496 KIFC1Q9BW19 673 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 DNAI2Q9GZS0 605 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 ACOT9Q9Y305 439 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 MYOCOSA0A1B0GUC4 107 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 TARM1B6A8C7 271 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 MYL3P08590 195 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 CHRM1P11229 460 aaPredicted RBP14.68□□□□□ -0.06
HDAC9-208ENST00000417496 BDNFP23560 247 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 LRPAP1P30533 357 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 PPARGP37231 505 aaPredicted RBP14.68□□□□□ -0.06
HDAC9-208ENST00000417496 HCAR3P49019 387 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 CSRP3P50461 194 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 SLC12A1Q13621 1099 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 GRB14Q14449 540 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 ZNF423Q2M1K9 1284 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 LRRC8EQ6NSJ5 796 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 BHLHE22Q8NFJ8 381 aaPredicted RBP14.68□□□□□ -0.06
HDAC9-208ENST00000417496 STYXQ8WUJ0 223 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 TSNARE1Q96NA8 513 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 GPR78Q96P69 363 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 NDNQ99608 321 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 FICDQ9BVA6 458 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 CYP4F12Q9HCS2 524 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 CHST12Q9NRB3 414 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 DTNAQ9Y4J8 743 aa14.68□□□□□ -0.06
HDAC9-208ENST00000417496 CABYRO75952 493 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 CXCR3P49682 368 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 ZNF789Q5FWF6 425 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 RAB41Q5JT25 222 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 PKN3Q6P5Z2 889 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 BNC2Q6ZN30 1099 aaPredicted RBP14.67□□□□□ -0.06
HDAC9-208ENST00000417496 PTAR1Q7Z6K3 402 aaPredicted RBP14.67□□□□□ -0.06
HDAC9-208ENST00000417496 ST13P4Q8IZP2 240 aaPredicted RBP14.67□□□□□ -0.06
HDAC9-208ENST00000417496 LILRA2Q8N149 483 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 DCUN1D1Q96GG9 259 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 FAM192AQ9GZU8 254 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 WDR41Q9HAD4 459 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 TNFRSF12AQ9NP84 129 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 UBAP1Q9NZ09 502 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 FLRT1Q9NZU1 646 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 GNEQ9Y223 722 aaKnown RBP14.67□□□□□ -0.06
HDAC9-208ENST00000417496 CDYLQ9Y232 598 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 COPG1Q9Y678 874 aaKnown RBP14.67□□□□□ -0.06
HDAC9-208ENST00000417496 TLL2Q9Y6L7 1015 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 FAM95CA0A1B0GW59 222 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 MTSS1O43312 755 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 MSI1O43347 362 aaKnown RBP14.67□□□□□ -0.06
HDAC9-208ENST00000417496 HDCP19113 662 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 EPHX2P34913 555 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 SLC1A2P43004 574 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 PLK1P53350 603 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 INHBEP58166 350 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 TAS2R39P59534 338 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 SATB1Q01826 763 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 NSUN2Q08J23 767 aaKnown RBP eCLIP14.67□□□□□ -0.06
HDAC9-208ENST00000417496 PRKAA1Q13131 559 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 PRPSAP1Q14558 356 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 PIGGQ5H8A4 983 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 SH2D4BQ5SQS7 431 aa14.67□□□□□ -0.06
HDAC9-208ENST00000417496 OGFRL1Q5TC84 451 aaPredicted RBP14.67□□□□□ -0.06
HDAC9-208ENST00000417496 DENND5AQ6IQ26 1287 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms