RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 FEM1AQ9BSK4 669 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 LRRC40Q9H9A6 602 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 ZNF510Q9Y2H8 683 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 OR51B4Q9Y5P0 310 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 WNT6Q9Y6F9 365 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 ZNF197O14709 1029 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 RGS16O15492 202 aaPredicted RBP17.25■□□□□ 0.35
CALD1-204ENST00000417172 CD160O95971 181 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 IFNAR2P48551 515 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 ZNF235Q14590 738 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 STAT4Q14765 748 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 FYB2Q5VWT5 728 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 ARRDC2Q8TBH0 407 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 ALG14Q96F25 216 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 STAMBPL1Q96FJ0 436 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 NSMCE3Q96MG7 304 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 TBL1YQ9BQ87 522 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 SLC25A51Q9H1U9 297 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 RETREG1Q9H6L5 497 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 IL1RAPL1Q9NZN1 696 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 UBA2Q9UBT2 640 aaPredicted RBP17.25■□□□□ 0.35
CALD1-204ENST00000417172 VPS28Q9UK41 221 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 AAR2Q9Y312 384 aaKnown RBP17.25■□□□□ 0.35
CALD1-204ENST00000417172 SDR42E2A6NKP2 422 aa17.24■□□□□ 0.35
CALD1-204ENST00000417172 ERI2A8K979 691 aaKnown RBP17.24■□□□□ 0.35
CALD1-204ENST00000417172 ATP9BO43861 1147 aa17.24■□□□□ 0.35
CALD1-204ENST00000417172 ANXA9O76027 345 aa17.24■□□□□ 0.35
CALD1-204ENST00000417172 POU2F2P09086 479 aa17.24■□□□□ 0.35
CALD1-204ENST00000417172 HPDP32754 393 aaPredicted RBP17.24■□□□□ 0.35
CALD1-204ENST00000417172 CD70P32970 193 aa17.24■□□□□ 0.35
CALD1-204ENST00000417172 PHBP35232 272 aa17.24■□□□□ 0.35
CALD1-204ENST00000417172 MAGOHP61326 146 aaKnown RBP17.24■□□□□ 0.35
CALD1-204ENST00000417172 USP4Q13107 963 aa17.24■□□□□ 0.35
CALD1-204ENST00000417172 MPPE1Q53F39 396 aa17.24■□□□□ 0.35
CALD1-204ENST00000417172 ELMSAN1Q6PJG2 1045 aa17.24■□□□□ 0.35
CALD1-204ENST00000417172 KDELC1Q6UW63 502 aa17.24■□□□□ 0.35
CALD1-204ENST00000417172 LRRC39Q96DD0 335 aa17.24■□□□□ 0.35
CALD1-204ENST00000417172 SEMA3CQ99985 751 aa17.24■□□□□ 0.35
CALD1-204ENST00000417172 ACSS3Q9H6R3 686 aa17.24■□□□□ 0.35
CALD1-204ENST00000417172 DOCK8Q8NF50 2099 aa17.24■□□□□ 0.35
CALD1-204ENST00000417172 CCDC78A2IDD5 438 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 CXorf49A8MYA2 514 aaPredicted RBP17.23■□□□□ 0.35
CALD1-204ENST00000417172 ZMPSTE24O75844 475 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 C1QAP02745 245 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 BMP8BP34820 402 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 ADRA1AP35348 466 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 VIPR2P41587 438 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 GEMP55040 296 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 WNT3AP56704 352 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 LMAN2Q12907 356 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 KBTBD12Q3ZCT8 623 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 DENND5AQ6IQ26 1287 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 CHRDL2Q6WN34 429 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 TLCD1Q96CP7 247 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 PGM2Q96G03 612 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 FSD1LQ9BXM9 530 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 ROPN1BQ9BZX4 212 aaPredicted RBP17.23■□□□□ 0.35
CALD1-204ENST00000417172 ROPN1Q9HAT0 212 aaPredicted RBP17.23■□□□□ 0.35
CALD1-204ENST00000417172 SMYD2Q9NRG4 433 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 EURLQ9NYK6 297 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 SLC17A6Q9P2U8 582 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 VPS51Q9UID3 782 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 HMGB1P1B2RPK0 211 aaPredicted RBP17.23■□□□□ 0.35
CALD1-204ENST00000417172 NEDD8-MDP1E9PL57 170 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 TCEA3O75764 348 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 MT-CO1P00395 513 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 TNK2Q07912 1038 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 TMED2Q15363 201 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 CYTH1Q15438 398 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 AGBL2Q5U5Z8 902 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 NAPEPLDQ6IQ20 393 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 GET4Q7L5D6 327 aaPredicted RBP17.23■□□□□ 0.35
CALD1-204ENST00000417172 NPAS3Q8IXF0 933 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 SLC25A41Q8N5S1 370 aa17.23■□□□□ 0.35
CALD1-204ENST00000417172 K7ERQ8 282 aa17.22■□□□□ 0.35
CALD1-204ENST00000417172 ATP1A2P50993 1020 aa17.22■□□□□ 0.35
CALD1-204ENST00000417172 SKOR1P84550 965 aa17.22■□□□□ 0.35
CALD1-204ENST00000417172 ASTLQ6HA08 431 aaPredicted RBP17.22■□□□□ 0.35
CALD1-204ENST00000417172 SYCE2Q6PIF2 218 aa17.22■□□□□ 0.35
CALD1-204ENST00000417172 MICALCLQ6ZW33 695 aa17.22■□□□□ 0.35
CALD1-204ENST00000417172 ZNF599Q96NL3 588 aa17.22■□□□□ 0.35
CALD1-204ENST00000417172 FCRL3Q96P31 734 aaPredicted RBP17.22■□□□□ 0.35
CALD1-204ENST00000417172 PAFAH2Q99487 392 aa17.22■□□□□ 0.35
CALD1-204ENST00000417172 CCDC77Q9BR77 488 aa17.22■□□□□ 0.35
CALD1-204ENST00000417172 CINPQ9BW66 212 aaPredicted RBP17.22■□□□□ 0.35
CALD1-204ENST00000417172 POLR1EQ9GZS1 481 aaKnown RBP17.22■□□□□ 0.35
CALD1-204ENST00000417172 INTS6Q9UL03 887 aaKnown RBP17.22■□□□□ 0.35
CALD1-204ENST00000417172 UGT1A9O60656 530 aa17.21■□□□□ 0.35
CALD1-204ENST00000417172 FAM155BO75949 473 aa17.21■□□□□ 0.35
CALD1-204ENST00000417172 TMCC1O94876 653 aa17.21■□□□□ 0.35
CALD1-204ENST00000417172 IVLP07476 585 aa17.21■□□□□ 0.35
CALD1-204ENST00000417172 CREB1P16220 341 aa17.21■□□□□ 0.35
CALD1-204ENST00000417172 CDH17Q12864 832 aa17.21■□□□□ 0.35
CALD1-204ENST00000417172 POU6F1Q14863 301 aa17.21■□□□□ 0.35
CALD1-204ENST00000417172 CRYMQ14894 314 aa17.21■□□□□ 0.35
CALD1-204ENST00000417172 TNFAIP8L3Q5GJ75 292 aa17.21■□□□□ 0.35
CALD1-204ENST00000417172 FAM78AQ5JUQ0 283 aa17.21■□□□□ 0.35
CALD1-204ENST00000417172 TRIM68Q6AZZ1 485 aa17.21■□□□□ 0.35
CALD1-204ENST00000417172 FAM76AQ8TAV0 307 aa17.21■□□□□ 0.35
CALD1-204ENST00000417172 GSDMBQ8TAX9 411 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms