RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 METTL5Q9NRN9 209 aaKnown RBP14.72□□□□□ -0.05
PAF1-202ENST00000416728 SAMSN1Q9NSI8 373 aaKnown RBP14.72□□□□□ -0.05
PAF1-202ENST00000416728 PPARGC1AQ9UBK2 798 aaKnown RBP14.72□□□□□ -0.05
PAF1-202ENST00000416728 FCF1Q9Y324 198 aaKnown RBP14.72□□□□□ -0.05
PAF1-202ENST00000416728 ITPR1Q14643 2758 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 NEMP2A6NFY4 417 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 EEF1GP26641 437 aaKnown RBP14.71□□□□□ -0.06
PAF1-202ENST00000416728 ITPKBP27987 946 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 L1CAMP32004 1257 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 ARL13BQ3SXY8 428 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 TCP11X2Q5H9J9 407 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 Q6ZSR6 202 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 TMC6Q7Z403 805 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 ZNF677Q86XU0 584 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 DCP2Q8IU60 420 aaKnown RBP14.71□□□□□ -0.06
PAF1-202ENST00000416728 SLC22A18ASQ8N1D0 253 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 BAP1Q92560 729 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 BBC3Q96PG8 261 aaPredicted RBP14.71□□□□□ -0.06
PAF1-202ENST00000416728 SLC17A9Q9BYT1 436 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 TM6SF2Q9BZW4 377 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 NUP62CLQ9H1M0 184 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 ZDHHC6Q9H6R6 413 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 DNAJC28Q9NX36 388 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 CHMP5Q9NZZ3 219 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 OR12D3Q9UGF7 316 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 FADS3Q9Y5Q0 445 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 HS3ST3A1Q9Y663 406 aa14.71□□□□□ -0.06
PAF1-202ENST00000416728 CXorf51AA0A1B0GTR3 108 aa14.7□□□□□ -0.06
PAF1-202ENST00000416728 AP1G1O43747 822 aa14.7□□□□□ -0.06
PAF1-202ENST00000416728 BRINP1O60477 761 aa14.7□□□□□ -0.06
PAF1-202ENST00000416728 PAK4O96013 591 aaPredicted RBP14.7□□□□□ -0.06
PAF1-202ENST00000416728 MT-CO3P00414 261 aa14.7□□□□□ -0.06
PAF1-202ENST00000416728 CKMT1AP12532 417 aa14.7□□□□□ -0.06
PAF1-202ENST00000416728 SDC4P31431 198 aa14.7□□□□□ -0.06
PAF1-202ENST00000416728 ADRA1BP35368 520 aa14.7□□□□□ -0.06
PAF1-202ENST00000416728 GEMIN4P57678 1058 aaKnown RBP14.7□□□□□ -0.06
PAF1-202ENST00000416728 HNRNPKP61978 463 aaKnown RBP eCLIP14.7□□□□□ -0.06
PAF1-202ENST00000416728 CDO1Q16878 200 aa14.7□□□□□ -0.06
PAF1-202ENST00000416728 ZNF542PQ5EBM4 170 aa14.7□□□□□ -0.06
PAF1-202ENST00000416728 RWDD4Q6NW29 188 aaKnown RBP14.7□□□□□ -0.06
PAF1-202ENST00000416728 KYAT3Q6YP21 454 aaKnown RBP14.7□□□□□ -0.06
PAF1-202ENST00000416728 KDM7AQ6ZMT4 941 aa14.7□□□□□ -0.06
PAF1-202ENST00000416728 PARS2Q7L3T8 475 aaKnown RBP14.7□□□□□ -0.06
PAF1-202ENST00000416728 ZSCAN30Q86W11 494 aa14.7□□□□□ -0.06
PAF1-202ENST00000416728 SNIP1Q8TAD8 396 aaKnown RBP14.7□□□□□ -0.06
PAF1-202ENST00000416728 SLC20A1Q8WUM9 679 aa14.7□□□□□ -0.06
PAF1-202ENST00000416728 ISG20Q96AZ6 181 aaKnown RBP14.7□□□□□ -0.06
PAF1-202ENST00000416728 BMFQ96LC9 184 aa14.7□□□□□ -0.06
PAF1-202ENST00000416728 EVA1BQ9NVM1 165 aa14.7□□□□□ -0.06
PAF1-202ENST00000416728 TAB2Q9NYJ8 693 aa14.7□□□□□ -0.06
PAF1-202ENST00000416728 NLGN3Q9NZ94 848 aa14.7□□□□□ -0.06
PAF1-202ENST00000416728 HECAQ9UBI9 543 aaPredicted RBP14.7□□□□□ -0.06
PAF1-202ENST00000416728 NOCTQ9UK39 431 aaKnown RBP14.7□□□□□ -0.06
PAF1-202ENST00000416728 FASNP49327 2511 aaKnown RBP14.69□□□□□ -0.06
PAF1-202ENST00000416728 POM121BA6NF01 834 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 NEMP1O14524 444 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 GFPT2O94808 682 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 GIMD1P0DJR0 217 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 MMP8P22894 467 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 ACTN2P35609 894 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 ACVRL1P37023 503 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 RABIFP47224 123 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 MAPKAPK2P49137 400 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 CDR2Q01850 454 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 NRG1Q02297 640 aaPredicted RBP14.69□□□□□ -0.06
PAF1-202ENST00000416728 SGCGQ13326 291 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 FGL2Q14314 439 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 C15orf59Q2T9L4 293 aaPredicted RBP14.69□□□□□ -0.06
PAF1-202ENST00000416728 CT47A1Q5JQC4 288 aaPredicted RBP14.69□□□□□ -0.06
PAF1-202ENST00000416728 MANEALQ5VSG8 457 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 PHLDB2Q86SQ0 1253 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 PLPP6Q8IY26 295 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 RYBPQ8N488 228 aaPredicted RBP14.69□□□□□ -0.06
PAF1-202ENST00000416728 OR6K2Q8NGY2 324 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 RXFP2Q8WXD0 754 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 FGF11Q92914 225 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 APOLD1Q96LR9 279 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 C11orf70Q9BRQ4 267 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 DUSP23Q9BVJ7 150 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 GANQ9H2C0 597 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 RETREG1Q9H6L5 497 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 CAAP1Q9H8G2 361 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 GPR27Q9NS67 375 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 DNAI1Q9UI46 699 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 HPCAL4Q9UM19 191 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 ACTL7AQ9Y615 435 aa14.69□□□□□ -0.06
PAF1-202ENST00000416728 SPTY2D1-AS1A0A0U1RR47 76 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 H3BM21 787 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 K7ESM1 405 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 FPGTO14772 594 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 SCAMP1O15126 338 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 RAD51BO15315 384 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 TSPAN6O43657 245 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 CD160O95971 181 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 CYP1A1P04798 512 aaPredicted RBP14.68□□□□□ -0.06
PAF1-202ENST00000416728 RHOQP17081 205 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 DUSP3P51452 185 aaPredicted RBP14.68□□□□□ -0.06
PAF1-202ENST00000416728 FMO1Q01740 532 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 FZD2Q14332 565 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 POLD3Q15054 466 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms