RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 NAT10Q9H0A0 1025 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 NDFIP2Q9NV92 336 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 DNAI1Q9UI46 699 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 HPCAL4Q9UM19 191 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 FCF1Q9Y324 198 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 TRPM6Q9BX84 2022 aa17.93■□□□□ 0.46
PDLIM2-208ENST00000416159 FRYQ5TBA9 3013 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 ANKRD62A6NC57 917 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 RNF103O00237 685 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 CD160O95971 181 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 C1SP09871 688 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 CDK4P11802 303 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 ITGB7P26010 798 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 AKT2P31751 481 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 L1CAMP32004 1257 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 CCNHP51946 323 aaPredicted RBP17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 TYRO3Q06418 890 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 ZNF284Q2VY69 593 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 CCDC157Q569K6 752 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 DNAJC24Q6P3W2 148 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 PROSER1Q86XN7 944 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 EID2Q8N6I1 236 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 AOPEPQ8N6M6 819 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 FAM174AQ8TBP5 190 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 KLK6Q92876 244 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 FEM1CQ96JP0 617 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 MAGEB5Q9BZ81 275 aa17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 CCDC86Q9H6F5 360 aaKnown RBP17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 HECAQ9UBI9 543 aaPredicted RBP17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 ARID1BQ8NFD5 2236 aaPredicted RBP17.92■□□□□ 0.46
PDLIM2-208ENST00000416159 TCRBV5S1A1TA0A578 114 aa17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 RAMP2O60895 175 aa17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 THEGLP0DJG4 465 aa17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 PRLRP16471 622 aa17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 DESP17661 470 aa17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 HNRNPA2B1P22626 353 aaKnown RBP17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 ZNF143P52747 638 aaPredicted RBP17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 POLD3Q15054 466 aaPredicted RBP17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 SMAD1Q15797 465 aaKnown RBP17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 EFHC2Q5JST6 749 aa17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 ACAD10Q6JQN1 1059 aa17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 PPP1R2P3Q6NXS1 205 aa17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 FBXL19Q6PCT2 694 aa17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 ZSCAN30Q86W11 494 aa17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 LRIG1Q96JA1 1093 aa17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 MYO6Q9UM54 1294 aa17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 ZFR2Q9UPR6 939 aaKnown RBP17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 CA5BQ9Y2D0 317 aa17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 ACTL7AQ9Y615 435 aa17.91■□□□□ 0.46
PDLIM2-208ENST00000416159 ZSCAN5CA6NGD5 496 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 SMTNL1A8MU46 457 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 TAF4O00268 1085 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 CCP110O43303 1012 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 KDELR3O43731 214 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 AP1G1O43747 822 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 GSRP00390 522 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 ATP1A3P13637 1013 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 ADRB3P13945 408 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 TNFAIP3P21580 790 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 AIF1P55008 147 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 SNRPD1P62314 119 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 RPS21P63220 83 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 SFMBT2Q5VUG0 894 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 KIAA1161Q6NSJ0 714 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 SCYL2Q6P3W7 929 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 DHRS13Q6UX07 377 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 KANSL1Q7Z3B3 1105 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 TMPRSS12Q86WS5 348 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 MCOLN2Q8IZK6 566 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 RYBPQ8N488 228 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 MYOCQ99972 504 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 TM6SF2Q9BZW4 377 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 ZDHHC6Q9H6R6 413 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 KLHL11Q9NVR0 708 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 NEU3Q9UQ49 428 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 FADS3Q9Y5Q0 445 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 HS3ST3A1Q9Y663 406 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 AKAP13Q12802 2813 aa17.9■□□□□ 0.46
PDLIM2-208ENST00000416159 RFPL3O75679 317 aa17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 POP4O95707 220 aaKnown RBP17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 EPHB2P29323 1055 aa17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 RPL7AP62424 266 aaKnown RBP17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 TMEM259Q4ZIN3 620 aa17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 SEL1L3Q68CR1 1132 aa17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 DCUN1D2Q6PH85 259 aa17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 IRF2BP2Q7Z5L9 587 aa17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 DCP2Q8IU60 420 aaKnown RBP17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 RTL3Q8N8U3 475 aaKnown RBP17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 OR2AP1Q8NGE2 309 aa17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 CASKIN2Q8WXE0 1202 aa17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 RAB7BQ96AH8 199 aa17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 VCPIP1Q96JH7 1222 aa17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 MCEEQ96PE7 176 aa17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 BPIFA3Q9BQP9 254 aa17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 CNPY3Q9BT09 278 aa17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 CATSPERBQ9H7T0 1116 aa17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 RTN4Q9NQC3 1192 aaKnown RBP17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 TMEM63CQ9P1W3 806 aa17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 FZD10Q9ULW2 581 aa17.89■□□□□ 0.45
PDLIM2-208ENST00000416159 C16orf96A6NNT2 1141 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms