RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 GTF3C2Q8WUA4 911 aaPredicted RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 MFSD3Q96ES6 412 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 ZFRQ96KR1 1074 aaKnown RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 CDRT15Q96T59 188 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 PKP2Q99959 881 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 MLPHQ9BV36 600 aaPredicted RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 TASP1Q9H6P5 420 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 LIN28AQ9H9Z2 209 aaKnown RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 PIGVQ9NUD9 493 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 HACD3Q9P035 362 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 RIMS3Q9UJD0 308 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 CDYLQ9Y232 598 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 AP4B1Q9Y6B7 739 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 MCM3APO60318 1980 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 NRCAMQ92823 1304 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 ZNF236Q9UL36 1845 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 TARM1B6A8C7 271 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 H0YJX3 145 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 GOLGA8TH3BQL2 631 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 H3BSA7 217 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 CFLARO15519 480 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 CACNG3O60359 315 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 NPHS1O60500 1241 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 BCAS2O75934 225 aaPredicted RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 PIGNO95427 931 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 CLPTM1O96005 669 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 PTPN1P18031 435 aaKnown RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 ME2P23368 584 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 CD68P34810 354 aaPredicted RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 RGS2P41220 211 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 PITX1P78337 314 aaPredicted RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 CREB5Q02930 508 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 NME3Q13232 169 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 MAP7Q14244 749 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 FLOT2Q14254 428 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 ARL13AQ5H913 290 aaPredicted RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 GLRA4Q5JXX5 417 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 GJC2Q5T442 439 aaPredicted RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 CERCAMQ5T4B2 595 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 SYPL2Q5VXT5 272 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 ZC3HC1Q86WB0 502 aaKnown RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 CCDC117Q8IWD4 279 aaPredicted RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 AHI1Q8N157 1196 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 TMIGD2Q96BF3 282 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 LENG1Q96BZ8 264 aaPredicted RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 DCPSQ96C86 337 aaKnown RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 TEKT5Q96M29 485 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 PRPF18Q99633 342 aaKnown RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 ZBTB26Q9HCK0 441 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 WDR6Q9NNW5 1121 aaKnown RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 CHRAC1Q9NRG0 131 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 IARS2Q9NSE4 1012 aaKnown RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 RHBDL2Q9NX52 303 aa9.94□□□□□ -0.82
CD44-206ENST00000415148 RUVBL2Q9Y230 463 aaKnown RBP9.94□□□□□ -0.82
CD44-206ENST00000415148 POLR2AP24928 1970 aaKnown RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 TRPC5OSA6NMA1 111 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 SBK3P0C264 359 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 CDK4P11802 303 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 TCN1P20061 433 aaPredicted RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 RPL10P27635 214 aaKnown RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 SLC5A2P31639 672 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 PSMD8P48556 350 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 GRM3Q14832 879 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 ADRM1Q16186 407 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 CNGA3Q16281 694 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 ZNF618Q5T7W0 954 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 SULF1Q8IWU6 871 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 CNTN4Q8IWV2 1026 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 RIN3Q8TB24 985 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 RCN3Q96D15 328 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 TSGA13Q96PP4 275 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 MRPS26Q9BYN8 205 aaKnown RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 UNKQ9C0B0 810 aaKnown RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 ZNF696Q9H7X3 374 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 MRM3Q9HC36 420 aaKnown RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 UTP6Q9NYH9 597 aaKnown RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 ZDHHC2Q9UIJ5 367 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 GJD2Q9UKL4 321 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 SLC39A10Q9ULF5 831 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 PADI4Q9UM07 663 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 GNEQ9Y223 722 aaKnown RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 AAR2Q9Y312 384 aaKnown RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 SMIM35A0A1B0GVV1 85 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 CCDC78A2IDD5 438 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 FAM72CH0Y354 149 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 STRNO43815 780 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 TNFAIP8O95379 198 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 FYNP06241 537 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 SRGAP2BP0DMP2 458 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 HSPA1AP0DMV8 641 aaKnown RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 HSPA1BP0DMV9 641 aaKnown RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 DARSP14868 501 aaKnown RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 TKTL1P51854 596 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 LILRA4P59901 499 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 COG7P83436 770 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 NSUN2Q08J23 767 aaKnown RBP eCLIP9.93□□□□□ -0.82
CD44-206ENST00000415148 ART3Q13508 389 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 USP10Q14694 798 aaKnown RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 DGKDQ16760 1214 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 USP41Q3LFD5 358 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms