RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 CLDN5O00501 218 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 ACSL4O60488 711 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 PTPN2P17706 415 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 KCNA4P22459 653 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 EDNRBP24530 442 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 WEE1P30291 646 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 SOAT1P35610 550 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 CLCNKBP51801 687 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 AP1S1P61966 158 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 ELP6Q0PNE2 266 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 ADRM1Q16186 407 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 MTSS1LQ765P7 747 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 ZC3H3Q8IXZ2 948 aaKnown RBP12.11□□□□□ -0.47
PTPRF-205ENST00000414879 BEND7Q8N7W2 519 aaPredicted RBP12.11□□□□□ -0.47
PTPRF-205ENST00000414879 LRRC57Q8N9N7 239 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 SUSD3Q96L08 255 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 HAPLN3Q96S86 360 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 PRRG3Q9BZD7 231 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 DPY30Q9C005 99 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 RETREG1Q9H6L5 497 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 ZDHHC6Q9H6R6 413 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 PNPLA8Q9NP80 782 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 A0A1W2PQH9 124 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 M0R3G1 203 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 PPP2R1BP30154 601 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 PBX3P40426 434 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 SERPINB10P48595 397 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 HCAR3P49019 387 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 NFYCQ13952 458 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 SERPINA13PQ6UXR4 307 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 HDAC7Q8WUI4 952 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 OMDQ99983 421 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 ASB8Q9H765 288 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 TLE6Q9H808 572 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 SLC27A5Q9Y2P5 690 aa12.11□□□□□ -0.47
PTPRF-205ENST00000414879 GCATO75600 419 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 CDKN2BP42772 138 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 TRIM69Q86WT6 500 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 SCUBE1Q8IWY4 988 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 SYTL1Q8IYJ3 562 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 ZNF75CPQ92670 426 aaPredicted RBP12.1□□□□□ -0.47
PTPRF-205ENST00000414879 PLEKHA8Q96JA3 519 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 SCN3BQ9NY72 215 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 LAMB2P55268 1798 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 LOC100653049A0A140TA62 436 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 PDZK1P1A8MUH7 402 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 IRAK2O43187 625 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 KRT34O76011 436 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 UNGP13051 313 aaPredicted RBP12.1□□□□□ -0.47
PTPRF-205ENST00000414879 TACR2P21452 398 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 GPC1P35052 558 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 ATP6V1E1P36543 226 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 VHLP40337 213 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 THOP1P52888 689 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 RAB10P61026 200 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 CSTF3Q12996 717 aaKnown RBP12.1□□□□□ -0.47
PTPRF-205ENST00000414879 PLCL1Q15111 1095 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 TPGS1Q6ZTW0 290 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 TCAIMQ8N3R3 496 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 CKAP2Q8WWK9 683 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 ALG3Q92685 438 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 C11orf49Q9H6J7 331 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 DCLRE1BQ9H816 532 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 SGTAO43765 313 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 NQO1P15559 274 aaKnown RBP12.1□□□□□ -0.47
PTPRF-205ENST00000414879 ASPAP45381 313 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 RPL14P50914 215 aaKnown RBP12.1□□□□□ -0.47
PTPRF-205ENST00000414879 WNT3AP56704 352 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 PURAQ00577 322 aaKnown RBP12.1□□□□□ -0.47
PTPRF-205ENST00000414879 CRY1Q16526 586 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 ATAT1Q5SQI0 421 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 AADATQ8N5Z0 425 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 METTL6Q8TCB7 284 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 WFIKKN2Q8TEU8 576 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 ELMO3Q96BJ8 720 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 TMEM109Q9BVC6 243 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 CEP41Q9BYV8 373 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 CYP4F12Q9HCS2 524 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 SNX6Q9UNH7 406 aa12.1□□□□□ -0.47
PTPRF-205ENST00000414879 E2F8A0AVK6 867 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 BTN3A1O00481 513 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 CCNT2O60583 730 aaKnown RBP12.09□□□□□ -0.47
PTPRF-205ENST00000414879 SLC10A3P09131 477 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 FAM153BP0C7A2 387 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 HNRNPDQ14103 355 aaKnown RBP12.09□□□□□ -0.47
PTPRF-205ENST00000414879 FAM153CQ494X1 144 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 IFNEQ86WN2 208 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 ZFP42Q96MM3 310 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 TMEM237Q96Q45 408 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 CCDC3Q9BQI4 270 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 SLC25A51Q9H1U9 297 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 SIX2Q9NPC8 291 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 CRYL1Q9Y2S2 319 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 GNG14A0A1W2PPG7 69 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 HNRNPCL2B2RXH8 293 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 TRAFD1O14545 582 aaPredicted RBP12.09□□□□□ -0.47
PTPRF-205ENST00000414879 NDST3O95803 873 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 HTR1BP28222 390 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 APLP1P51693 650 aa12.09□□□□□ -0.47
PTPRF-205ENST00000414879 GHRHRQ02643 423 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms