RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 PCDH19Q8TAB3 1148 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 PIP4K2CQ8TBX8 421 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 RAPGEF5Q92565 580 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 FATE1Q969F0 183 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 ERLEC1Q96DZ1 483 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 TOE1Q96GM8 510 aaKnown RBP14.89□□□□□ -0.03
LIMS1-206ENST00000414829 ALS2CR12Q96Q35 445 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 FAM129BQ96TA1 746 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 TM6SF2Q9BZW4 377 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 BRD8Q9H0E9 1235 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 SLC6A17Q9H1V8 727 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 TNKS2Q9H2K2 1166 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 WSB2Q9NYS7 404 aaPredicted RBP14.89□□□□□ -0.03
LIMS1-206ENST00000414829 SUSD2Q9UGT4 822 aa14.89□□□□□ -0.03
LIMS1-206ENST00000414829 MEI4A8MW99 385 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 KPNA3O00505 521 aaPredicted RBP14.88□□□□□ -0.03
LIMS1-206ENST00000414829 PPP1R12AO14974 1030 aaPredicted RBP14.88□□□□□ -0.03
LIMS1-206ENST00000414829 SMAD6O43541 496 aaKnown RBP14.88□□□□□ -0.03
LIMS1-206ENST00000414829 MFSD11O43934 449 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 ZNF189O75820 626 aaPredicted RBP14.88□□□□□ -0.03
LIMS1-206ENST00000414829 NEBLO76041 1014 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 SEMA4FO95754 770 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 TNNT1P13805 278 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 IL4RP24394 825 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 CTNNA2P26232 953 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 NUDT1P36639 197 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 GARSP41250 739 aaKnown RBP14.88□□□□□ -0.03
LIMS1-206ENST00000414829 NR2C2P49116 596 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 RWDD2BP57060 319 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 GALNT2Q10471 571 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 MMRN1Q13201 1228 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 ZNF235Q14590 738 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 GSE1Q14687 1217 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 PPP2R5EQ16537 467 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 ATP13A4Q4VNC1 1196 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 RALGPS1Q5JS13 557 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 DPY19L3Q6ZPD9 716 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 CCDC50Q8IVM0 306 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 RYBPQ8N488 228 aaPredicted RBP14.88□□□□□ -0.03
LIMS1-206ENST00000414829 HDDC3Q8N4P3 179 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 GRIN3AQ8TCU5 1115 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 TUBGCP5Q96RT8 1024 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 MTG2Q9H4K7 406 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 AMACRQ9UHK6 382 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 AMFRQ9UKV5 643 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 MFHAS1Q9Y4C4 1052 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 CKAP5Q14008 2032 aa14.88□□□□□ -0.03
LIMS1-206ENST00000414829 A0A1W2PP55 124 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 GRID2IPA4D2P6 1211 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 CD160O95971 181 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 GNSP15586 552 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 BCKDHBP21953 392 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 TGM2P21980 687 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 ITGB7P26010 798 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 CSNK1DP48730 415 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 DHPSP49366 369 aaPredicted RBP14.87□□□□□ -0.03
LIMS1-206ENST00000414829 NEK3P51956 506 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 AP1S1P61966 158 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 CCZ1BP86790 482 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 CCZ1P86791 482 aaPredicted RBP14.87□□□□□ -0.03
LIMS1-206ENST00000414829 NSUN2Q08J23 767 aaKnown RBP eCLIP14.87□□□□□ -0.03
LIMS1-206ENST00000414829 LBRQ14739 615 aaKnown RBP14.87□□□□□ -0.03
LIMS1-206ENST00000414829 PDK1Q15118 436 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 CFAP58Q5T655 872 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 SLC9A4Q6AI14 798 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 CPNE8Q86YQ8 564 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 RFX6Q8HWS3 928 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 LRRC57Q8N9N7 239 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 OR2T34Q8NGX1 318 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 RAB7BQ96AH8 199 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 HDAC11Q96DB2 347 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 PSKH2Q96QS6 385 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 HDAC8Q9BY41 377 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 ZDHHC6Q9H6R6 413 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 ETNK2Q9NVF9 386 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 MBD1Q9UIS9 605 aaPredicted RBP14.87□□□□□ -0.03
LIMS1-206ENST00000414829 SALL4Q9UJQ4 1053 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 TFR2Q9UP52 801 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 INVSQ9Y283 1065 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 EFR3BQ9Y2G0 817 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 HYOU1Q9Y4L1 999 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 PCDHA3Q9Y5H8 950 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 DUSP10Q9Y6W6 482 aa14.87□□□□□ -0.03
LIMS1-206ENST00000414829 DOCK4Q8N1I0 1966 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 A0A1W2PQ67 120 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 C3orf70A6NLC5 250 aaPredicted RBP14.86□□□□□ -0.03
LIMS1-206ENST00000414829 J3KR12 359 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 KRIT1O00522 736 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 MAFKO60675 156 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 ZNF821O75541 412 aaPredicted RBP14.86□□□□□ -0.03
LIMS1-206ENST00000414829 LEFTY1O75610 366 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 CCNCP24863 283 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 NFKBIAP25963 317 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 MPLP40238 635 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 CDKN2BP42772 138 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 SUOXP51687 545 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 HNRNPDQ14103 355 aaKnown RBP14.86□□□□□ -0.03
LIMS1-206ENST00000414829 LPAL2Q16609 132 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 TAZQ16635 292 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 MYLK3Q32MK0 819 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms