RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 NOL6Q9H6R4 1146 aaKnown RBP14.97□□□□□ -0.01
CHD1-202ENST00000414220 PARD6AQ9NPB6 346 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 HAUS2Q9NVX0 235 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 DDX56Q9NY93 547 aaKnown RBP14.97□□□□□ -0.01
CHD1-202ENST00000414220 CDV3Q9UKY7 258 aaKnown RBP14.97□□□□□ -0.01
CHD1-202ENST00000414220 PTPRZ1P23471 2315 aaPredicted RBP14.97□□□□□ -0.01
CHD1-202ENST00000414220 A0A0A6YYK5 440 aaPredicted RBP14.96□□□□□ -0.01
CHD1-202ENST00000414220 A0A1B0GTW7 788 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 PRAMEF11O60813 436 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 PALMO75781 387 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 TMCC1O94876 653 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 TCF4P15884 667 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 TGM1P22735 817 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 AMPD1P23109 780 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 NUDT1P36639 197 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 RENBPP51606 427 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 IL10RBQ08334 325 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 TEAD4Q15561 434 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 LRRC38Q5VT99 294 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 PEAR1Q5VY43 1037 aaPredicted RBP14.96□□□□□ -0.01
CHD1-202ENST00000414220 KIAA0895LQ68EN5 471 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 SLC23A3Q6PIS1 610 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 PRPF39Q86UA1 669 aaKnown RBP14.96□□□□□ -0.01
CHD1-202ENST00000414220 RHOT1Q8IXI2 618 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 GRIN3AQ8TCU5 1115 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.96□□□□□ -0.01
CHD1-202ENST00000414220 DNASE2BQ8WZ79 361 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 ZNF599Q96NL3 588 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 ZDHHC6Q9H6R6 413 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.96□□□□□ -0.01
CHD1-202ENST00000414220 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.96□□□□□ -0.01
CHD1-202ENST00000414220 DOCK4Q8N1I0 1966 aa14.96□□□□□ -0.01
CHD1-202ENST00000414220 MUC22E2RYF6 1773 aaPredicted RBP14.96□□□□□ -0.02
CHD1-202ENST00000414220 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.95□□□□□ -0.02
CHD1-202ENST00000414220 SOWAHDA6NJG2 315 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 KRIT1O00522 736 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 BCAT2O15382 392 aaPredicted RBP14.95□□□□□ -0.02
CHD1-202ENST00000414220 LEFTY1O75610 366 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 CD160O95971 181 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 SERPINF2P08697 491 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 FECHP22830 423 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 HADHBP55084 474 aaKnown RBP14.95□□□□□ -0.02
CHD1-202ENST00000414220 CNTN1Q12860 1018 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 SF3A2Q15428 464 aaKnown RBP14.95□□□□□ -0.02
CHD1-202ENST00000414220 IFI16Q16666 785 aaKnown RBP14.95□□□□□ -0.02
CHD1-202ENST00000414220 MYLK3Q32MK0 819 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 CFAP58Q5T655 872 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 TXNRD3NBQ6F5E7 133 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 NEK5Q6P3R8 708 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 FBXL19Q6PCT2 694 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 NCEH1Q6PIU2 408 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 LEKR1Q6ZMV7 388 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 ERN2Q76MJ5 926 aaKnown RBP14.95□□□□□ -0.02
CHD1-202ENST00000414220 KIAA1328Q86T90 577 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 ATPAF2Q8N5M1 289 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 AADATQ8N5Z0 425 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 FAM71BQ8TC56 605 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 ZNF830Q96NB3 372 aaPredicted RBP14.95□□□□□ -0.02
CHD1-202ENST00000414220 CINPQ9BW66 212 aaPredicted RBP14.95□□□□□ -0.02
CHD1-202ENST00000414220 HDAC8Q9BY41 377 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 C6orf106Q9H6K1 298 aaPredicted RBP14.95□□□□□ -0.02
CHD1-202ENST00000414220 IPO11Q9UI26 975 aaKnown RBP14.95□□□□□ -0.02
CHD1-202ENST00000414220 SARDHQ9UL12 918 aa14.95□□□□□ -0.02
CHD1-202ENST00000414220 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.95□□□□□ -0.02
CHD1-202ENST00000414220 EML5Q05BV3 1969 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 THADAQ6YHU6 1953 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 ATXN2Q99700 1313 aaKnown RBP14.94□□□□□ -0.02
CHD1-202ENST00000414220 J3KR12 359 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 PLRG1O43660 514 aaKnown RBP14.94□□□□□ -0.02
CHD1-202ENST00000414220 ZNF821O75541 412 aaPredicted RBP14.94□□□□□ -0.02
CHD1-202ENST00000414220 NEBLO76041 1014 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 ZFXP17010 805 aaPredicted RBP14.94□□□□□ -0.02
CHD1-202ENST00000414220 MX2P20592 715 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 ITGB7P26010 798 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 CD27P26842 260 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 MAOBP27338 520 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 HSPA9P38646 679 aaKnown RBP14.94□□□□□ -0.02
CHD1-202ENST00000414220 MAPK8P45983 427 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 CCR5P51681 352 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 NEK3P51956 506 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 ADPRHP54922 357 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 TAS2R40P59535 323 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 DPYSL3Q14195 570 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 POM121L1PQ3SYA9 428 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 SLC45A4Q5BKX6 768 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 ANKRD20A8PQ5CZ79 823 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 AFMIDQ63HM1 303 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 ADAT2Q7Z6V5 191 aaKnown RBP14.94□□□□□ -0.02
CHD1-202ENST00000414220 ZSCAN30Q86W11 494 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 VSIG1Q86XK7 387 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 PAF1Q8N7H5 531 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 CHST14Q8NCH0 376 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 RAB7BQ96AH8 199 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 BIRC7Q96CA5 298 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 EDEM2Q9BV94 578 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 ZDHHC5Q9C0B5 715 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 PREBQ9HCU5 417 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 TMEM74BQ9NUR3 256 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 SERGEFQ9UGK8 458 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 SEPT3Q9UH03 358 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms