RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 SLC9A4Q6AI14 798 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 LPCAT2Q7L5N7 544 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 DSG4Q86SJ6 1040 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 KIAA1328Q86T90 577 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 FAM124AQ86V42 546 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 ZNF354CQ86Y25 554 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 MAP7D3Q8IWC1 876 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 PLD5Q8N7P1 536 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 TMIEQ8NEW7 156 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 KRT35Q92764 455 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 ARRDC3Q96B67 414 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 CCDC114Q96M63 670 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 GPR174Q9BXC1 333 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 NEUROG2Q9H2A3 272 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 DDX56Q9NY93 547 aaKnown RBP13.39□□□□□ -0.27
HDAC8-210ENST00000412342 NCDNQ9UBB6 729 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 UBA2Q9UBT2 640 aaPredicted RBP13.39□□□□□ -0.27
HDAC8-210ENST00000412342 IL36AQ9UHA7 158 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 IPO11Q9UI26 975 aaKnown RBP13.39□□□□□ -0.27
HDAC8-210ENST00000412342 GMEB2Q9UKD1 530 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 PCDHGA5Q9Y5G8 931 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 PCDH15Q96QU1 1955 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 PLXNA2O75051 1894 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 C1QTNF3-AMACRE9PGA6 284 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 PLK4O00444 970 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 MUSKO15146 869 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 MAP3K13O43283 966 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 LEFTY1O75610 366 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 RNASEH2AO75792 299 aaKnown RBP13.38□□□□□ -0.27
HDAC8-210ENST00000412342 GKP32189 559 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 CDKN2BP42772 138 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 RGRP47804 291 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 DHPSP49366 369 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-210ENST00000412342 GBE1Q04446 702 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 ZNF33AQ06730 810 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 GALNT2Q10471 571 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 KIF5AQ12840 1032 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 CNTN1Q12860 1018 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 SLC10A2Q12908 348 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-210ENST00000412342 ARSIQ5FYB1 569 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 ATXN7L2Q5T6C5 722 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-210ENST00000412342 PIP5KL1Q5T9C9 394 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 FAM46CQ5VWP2 391 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 MFSD7Q6UXD7 560 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 ARMCX6Q7L4S7 300 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 DAAM2Q86T65 1068 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 KATNAL2Q8IYT4 538 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 HDDC3Q8N4P3 179 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 DEFB119Q8N690 84 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 CADM4Q8NFZ8 388 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 OR6K2Q8NGY2 324 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 GRIN3AQ8TCU5 1115 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 RNF25Q96BH1 459 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-210ENST00000412342 HSPA12BQ96MM6 686 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 ZNF599Q96NL3 588 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 HEPHQ9BQS7 1158 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 ORAI3Q9BRQ5 295 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 BTBD1Q9H0C5 482 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 PCED1AQ9H1Q7 454 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 ARRDC1-AS1Q9H2J1 176 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 C6orf106Q9H6K1 298 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-210ENST00000412342 SP110Q9HB58 689 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 SGK2Q9HBY8 427 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 TMEM74BQ9NUR3 256 aa13.38□□□□□ -0.27
HDAC8-210ENST00000412342 HECAQ9UBI9 543 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-210ENST00000412342 METTL12A8MUP2 240 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 LRP3O75074 770 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 NDUFS2O75306 463 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 MAP3K6O95382 1288 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 SEMA4FO95754 770 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 PRNPP04156 253 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 TNNT1P13805 278 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 ITPKAP23677 461 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 CTNNA1P35221 906 aaKnown RBP13.37□□□□□ -0.27
HDAC8-210ENST00000412342 MPLP40238 635 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 RECQLP46063 649 aaPredicted RBP13.37□□□□□ -0.27
HDAC8-210ENST00000412342 DNA2P51530 1060 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 ADPRHP54922 357 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 TAS2R38P59533 333 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 RHOAP61586 193 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 SNRPD1P62314 119 aaKnown RBP13.37□□□□□ -0.27
HDAC8-210ENST00000412342 SLC10A7Q0GE19 358 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 RFTN1Q14699 578 aaPredicted RBP13.37□□□□□ -0.27
HDAC8-210ENST00000412342 POM121L1PQ3SYA9 428 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 LYSMD4Q5XG99 296 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 NT5DC3Q86UY8 548 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 DNASE2BQ8WZ79 361 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 LRIG1Q96JA1 1093 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 PDLIM2Q96JY6 352 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 EXOC2Q96KP1 924 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 NSMCE3Q96MG7 304 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 GDAP1L1Q96MZ0 367 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 ZDHHC6Q9H6R6 413 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 DTLQ9NZJ0 730 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 PILRBQ9UKJ0 227 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 FARP1Q9Y4F1 1045 aaPredicted RBP13.37□□□□□ -0.27
HDAC8-210ENST00000412342 CAPN6Q9Y6Q1 641 aa13.37□□□□□ -0.27
HDAC8-210ENST00000412342 MACROD2A1Z1Q3 448 aa13.36□□□□□ -0.27
HDAC8-210ENST00000412342 KPNA3O00505 521 aaPredicted RBP13.36□□□□□ -0.27
HDAC8-210ENST00000412342 INSIG1O15503 277 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms