RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 HEPHQ9BQS7 1158 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 HDAC8Q9BY41 377 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 TM6SF2Q9BZW4 377 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 IFNKQ9P0W0 207 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 PCOLCE2Q9UKZ9 415 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 TPX2Q9ULW0 747 aaKnown RBP18.04■□□□□ 0.48
LSM5-204ENST00000409909 HPCAL4Q9UM19 191 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 CAPN11Q9UMQ6 739 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 PCDHGB2Q9Y5G2 931 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 WDFY3Q8IZQ1 3526 aa18.04■□□□□ 0.48
LSM5-204ENST00000409909 TP53BP1Q12888 1972 aaPredicted RBP18.04■□□□□ 0.48
LSM5-204ENST00000409909 WASH4PA8MWX3 477 aa18.03■□□□□ 0.48
LSM5-204ENST00000409909 RNGTTO60942 597 aaKnown RBP18.03■□□□□ 0.48
LSM5-204ENST00000409909 GKP32189 559 aa18.03■□□□□ 0.48
LSM5-204ENST00000409909 ZBED6P86452 979 aa18.03■□□□□ 0.48
LSM5-204ENST00000409909 HNRNPDQ14103 355 aaKnown RBP18.03■□□□□ 0.48
LSM5-204ENST00000409909 SKOR2Q2VWA4 1001 aaPredicted RBP18.03■□□□□ 0.48
LSM5-204ENST00000409909 CYP4V2Q6ZWL3 525 aaPredicted RBP18.03■□□□□ 0.48
LSM5-204ENST00000409909 ERN2Q76MJ5 926 aaKnown RBP18.03■□□□□ 0.48
LSM5-204ENST00000409909 PRPF39Q86UA1 669 aaKnown RBP18.03■□□□□ 0.48
LSM5-204ENST00000409909 PLPP6Q8IY26 295 aa18.03■□□□□ 0.48
LSM5-204ENST00000409909 SETD7Q8WTS6 366 aaKnown RBP18.03■□□□□ 0.48
LSM5-204ENST00000409909 ZNF653Q96CK0 615 aa18.03■□□□□ 0.48
LSM5-204ENST00000409909 HMCESQ96FZ2 354 aa18.03■□□□□ 0.48
LSM5-204ENST00000409909 PREBQ9HCU5 417 aa18.03■□□□□ 0.48
LSM5-204ENST00000409909 PCSK1NQ9UHG2 260 aa18.03■□□□□ 0.48
LSM5-204ENST00000409909 BTBD3Q9Y2F9 522 aa18.03■□□□□ 0.48
LSM5-204ENST00000409909 RASA4BC9J798 803 aa18.02■□□□□ 0.48
LSM5-204ENST00000409909 RASA4O43374 803 aa18.02■□□□□ 0.48
LSM5-204ENST00000409909 MIPP30301 263 aa18.02■□□□□ 0.48
LSM5-204ENST00000409909 GEMIN4P57678 1058 aaKnown RBP18.02■□□□□ 0.48
LSM5-204ENST00000409909 ERMARDQ5T6L9 678 aa18.02■□□□□ 0.48
LSM5-204ENST00000409909 NAPEPLDQ6IQ20 393 aa18.02■□□□□ 0.48
LSM5-204ENST00000409909 UMODL1-AS1Q8N2C9 162 aa18.02■□□□□ 0.48
LSM5-204ENST00000409909 NETO2Q8NC67 525 aa18.02■□□□□ 0.48
LSM5-204ENST00000409909 OR6K2Q8NGY2 324 aa18.02■□□□□ 0.48
LSM5-204ENST00000409909 BAHD1Q8TBE0 780 aaPredicted RBP18.02■□□□□ 0.48
LSM5-204ENST00000409909 FNIP1Q8TF40 1166 aa18.02■□□□□ 0.48
LSM5-204ENST00000409909 ZDHHC6Q9H6R6 413 aa18.02■□□□□ 0.48
LSM5-204ENST00000409909 CATSPERBQ9H7T0 1116 aa18.02■□□□□ 0.48
LSM5-204ENST00000409909 DYRK4Q9NR20 520 aa18.02■□□□□ 0.48
LSM5-204ENST00000409909 MYO1AQ9UBC5 1043 aa18.02■□□□□ 0.48
LSM5-204ENST00000409909 AP4E1Q9UPM8 1137 aa18.02■□□□□ 0.48
LSM5-204ENST00000409909 PCDHB9Q9Y5E1 797 aa18.02■□□□□ 0.48
LSM5-204ENST00000409909 BZW2Q9Y6E2 419 aaKnown RBP18.02■□□□□ 0.48
LSM5-204ENST00000409909 USP24Q9UPU5 2620 aa18.02■□□□□ 0.47
LSM5-204ENST00000409909 KMT2BQ9UMN6 2715 aaPredicted RBP18.01■□□□□ 0.47
LSM5-204ENST00000409909 A0A1W2PQU0 124 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 TLR4O00206 839 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 FGF10O15520 208 aaPredicted RBP18.01■□□□□ 0.47
LSM5-204ENST00000409909 BUB1O43683 1085 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 PCDHGA12O60330 932 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 GYPCP04921 128 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 SERPING1P05155 500 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 MYBL1P10243 752 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 DESP17661 470 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 ITGB7P26010 798 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 NUDT1P36639 197 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 YBEYP58557 167 aaPredicted RBP18.01■□□□□ 0.47
LSM5-204ENST00000409909 TPI1P60174 286 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 IL9RQ01113 521 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 SERINC3Q13530 473 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 SHBQ15464 509 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 ZNF284Q2VY69 593 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 TDRD12Q587J7 1177 aaKnown RBP18.01■□□□□ 0.47
LSM5-204ENST00000409909 ATXN7L2Q5T6C5 722 aaPredicted RBP18.01■□□□□ 0.47
LSM5-204ENST00000409909 KLK6Q92876 244 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 TRIM11Q96F44 468 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 KCTD15Q96SI1 283 aaPredicted RBP18.01■□□□□ 0.47
LSM5-204ENST00000409909 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.01■□□□□ 0.47
LSM5-204ENST00000409909 SNRNP25Q9BV90 132 aaKnown RBP18.01■□□□□ 0.47
LSM5-204ENST00000409909 XPO4Q9C0E2 1151 aaKnown RBP18.01■□□□□ 0.47
LSM5-204ENST00000409909 DHX35Q9H5Z1 703 aaKnown RBP18.01■□□□□ 0.47
LSM5-204ENST00000409909 ZFR2Q9UPR6 939 aaKnown RBP18.01■□□□□ 0.47
LSM5-204ENST00000409909 DMTF1Q9Y222 760 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 CA5BQ9Y2D0 317 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 SCINQ9Y6U3 715 aa18.01■□□□□ 0.47
LSM5-204ENST00000409909 A0A1B0GTQ1 180 aa18■□□□□ 0.47
LSM5-204ENST00000409909 ZSCAN5CA6NGD5 496 aaPredicted RBP18■□□□□ 0.47
LSM5-204ENST00000409909 FLRT2O43155 660 aa18■□□□□ 0.47
LSM5-204ENST00000409909 HYAL3O43820 417 aaPredicted RBP18■□□□□ 0.47
LSM5-204ENST00000409909 LRCH4O75427 683 aa18■□□□□ 0.47
LSM5-204ENST00000409909 RNF8O76064 485 aa18■□□□□ 0.47
LSM5-204ENST00000409909 TMCC1O94876 653 aa18■□□□□ 0.47
LSM5-204ENST00000409909 GSRP00390 522 aa18■□□□□ 0.47
LSM5-204ENST00000409909 ADRB3P13945 408 aa18■□□□□ 0.47
LSM5-204ENST00000409909 PRLRP16471 622 aa18■□□□□ 0.47
LSM5-204ENST00000409909 HTR7P34969 479 aa18■□□□□ 0.47
LSM5-204ENST00000409909 CCT8P50990 548 aa18■□□□□ 0.47
LSM5-204ENST00000409909 NXPH1P58417 271 aa18■□□□□ 0.47
LSM5-204ENST00000409909 CCDC15Q0P6D6 951 aa18■□□□□ 0.47
LSM5-204ENST00000409909 SUZ12Q15022 739 aaKnown RBP18■□□□□ 0.47
LSM5-204ENST00000409909 MYLK3Q32MK0 819 aa18■□□□□ 0.47
LSM5-204ENST00000409909 PARP15Q460N3 678 aa18■□□□□ 0.47
LSM5-204ENST00000409909 SETMARQ53H47 684 aaPredicted RBP18■□□□□ 0.47
LSM5-204ENST00000409909 NEK5Q6P3R8 708 aa18■□□□□ 0.47
LSM5-204ENST00000409909 PARS2Q7L3T8 475 aaKnown RBP18■□□□□ 0.47
LSM5-204ENST00000409909 GLRX5Q86SX6 157 aa18■□□□□ 0.47
LSM5-204ENST00000409909 HORMAD1Q86X24 394 aa18■□□□□ 0.47
LSM5-204ENST00000409909 SPATS2Q86XZ4 545 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms