RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 RAB23Q9ULC3 237 aa22.74■■□□□ 1.23
PTCD3-203ENST00000409783 PCDHA3Q9Y5H8 950 aa22.74■■□□□ 1.23
PTCD3-203ENST00000409783 CAPN6Q9Y6Q1 641 aa22.74■■□□□ 1.23
PTCD3-203ENST00000409783 RIF1Q5UIP0 2472 aaKnown RBP22.73■■□□□ 1.23
PTCD3-203ENST00000409783 A0A1W2PP55 124 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 C10orf142B7Z368 130 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 MAP3K13O43283 966 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 PALMO75781 387 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 RHOBTB1O94844 696 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 CTNNA2P26232 953 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 ACSL1P33121 698 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 RECQLP46063 649 aaPredicted RBP22.73■■□□□ 1.23
PTCD3-203ENST00000409783 PEX5P50542 639 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 SNRPD1P62314 119 aaKnown RBP22.73■■□□□ 1.23
PTCD3-203ENST00000409783 RPL6Q02878 288 aaKnown RBP22.73■■□□□ 1.23
PTCD3-203ENST00000409783 ELF2Q15723 593 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 IFI16Q16666 785 aaKnown RBP22.73■■□□□ 1.23
PTCD3-203ENST00000409783 ARSIQ5FYB1 569 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 SPDYCQ5MJ68 293 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 ATXN7L2Q5T6C5 722 aaPredicted RBP22.73■■□□□ 1.23
PTCD3-203ENST00000409783 SPOCD1Q6ZMY3 1216 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 FAM124AQ86V42 546 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 SLC41A1Q8IVJ1 513 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 ZNF599Q96NL3 588 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 NEUROG2Q9H2A3 272 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 DTLQ9NZJ0 730 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 HECAQ9UBI9 543 aaPredicted RBP22.73■■□□□ 1.23
PTCD3-203ENST00000409783 IL36AQ9UHA7 158 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 FARP1Q9Y4F1 1045 aaPredicted RBP22.73■■□□□ 1.23
PTCD3-203ENST00000409783 GON4LQ3T8J9 2241 aa22.73■■□□□ 1.23
PTCD3-203ENST00000409783 PLK4O00444 970 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 LEFTY1O75610 366 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 EPN2O95208 641 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 MAP3K6O95382 1288 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 PRNPP04156 253 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 CCDC175P0C221 793 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 PTGER3P43115 390 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 RHOAP61586 193 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 MYLK3Q32MK0 819 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 FAM46CQ5VWP2 391 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 LPCAT2Q7L5N7 544 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 LRRC49Q8IUZ0 686 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 RCOR2Q8IZ40 523 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 HDDC3Q8N4P3 179 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 DEFB119Q8N690 84 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 OR6K2Q8NGY2 324 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 EXD1Q8NHP7 514 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 GRIN3AQ8TCU5 1115 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 ARRDC3Q96B67 414 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 ZNF419Q96HQ0 510 aaPredicted RBP22.72■■□□□ 1.23
PTCD3-203ENST00000409783 GPR174Q9BXC1 333 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 TSGA10Q9BZW7 698 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 KCNF1Q9H3M0 494 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 FZD4Q9ULV1 537 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 EP300Q09472 2414 aaPredicted RBP22.72■■□□□ 1.23
PTCD3-203ENST00000409783 RALGAPA1Q6GYQ0 2036 aa22.72■■□□□ 1.23
PTCD3-203ENST00000409783 C1QTNF3-AMACRE9PGA6 284 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 MUSKO15146 869 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 KRT86O43790 486 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 GFRA3O60609 400 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 RNASEH2AO75792 299 aaKnown RBP22.71■■□□□ 1.23
PTCD3-203ENST00000409783 ZRANB2O95218 330 aaKnown RBP eCLIP22.71■■□□□ 1.23
PTCD3-203ENST00000409783 RETP07949 1114 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 GKP32189 559 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 GARSP41250 739 aaKnown RBP22.71■■□□□ 1.23
PTCD3-203ENST00000409783 RGRP47804 291 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 ADCY2Q08462 1091 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 SLC10A7Q0GE19 358 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 RFTN1Q14699 578 aaPredicted RBP22.71■■□□□ 1.23
PTCD3-203ENST00000409783 POM121L1PQ3SYA9 428 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 ATPAF2Q8N5M1 289 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 TSEN2Q8NCE0 465 aaKnown RBP22.71■■□□□ 1.23
PTCD3-203ENST00000409783 ALG3Q92685 438 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 GDAP1L1Q96MZ0 367 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 BTBD1Q9H0C5 482 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 SGK2Q9HBY8 427 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 GUCA1BQ9UMX6 200 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 NCKAP1Q9Y2A7 1128 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.71■■□□□ 1.23
PTCD3-203ENST00000409783 FAM186AA6NE01 2351 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 PIEZO1Q92508 2521 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 FRYLO94915 3013 aa22.71■■□□□ 1.23
PTCD3-203ENST00000409783 hCG_1818297A0A087WSY0 165 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 CCDC66A2RUB6 948 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 NDUFS2O75306 463 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 POP4O95707 220 aaKnown RBP22.7■■□□□ 1.22
PTCD3-203ENST00000409783 KRT10P13645 584 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 CNTN1Q12860 1018 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 SFSWAPQ12872 951 aaKnown RBP22.7■■□□□ 1.22
PTCD3-203ENST00000409783 LBRQ14739 615 aaKnown RBP22.7■■□□□ 1.22
PTCD3-203ENST00000409783 TMCO4Q5TGY1 634 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 AGBL4Q5VU57 503 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 RFX6Q8HWS3 928 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 SYCE1Q8N0S2 351 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 DCLK2Q8N568 766 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 RUBCNQ92622 972 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 LRIG1Q96JA1 1093 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 EXOC2Q96KP1 924 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 TSGA13Q96PP4 275 aa22.7■■□□□ 1.22
PTCD3-203ENST00000409783 PSKH2Q96QS6 385 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms