RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 RIT2Q99578 217 aa6.6□□□□□ -1.35
LSM5-203ENST00000409782 SLC46A2Q9BY10 475 aa6.6□□□□□ -1.35
LSM5-203ENST00000409782 SLC28A3Q9HAS3 691 aa6.6□□□□□ -1.35
LSM5-203ENST00000409782 NOD2Q9HC29 1040 aa6.6□□□□□ -1.35
LSM5-203ENST00000409782 ZNF302Q9NR11 478 aa6.6□□□□□ -1.35
LSM5-203ENST00000409782 ORC3Q9UBD5 711 aaPredicted RBP6.6□□□□□ -1.35
LSM5-203ENST00000409782 KDM3AQ9Y4C1 1321 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 CHD7Q9P2D1 2997 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 CYP3A7-CYP3A51PA0A087WV96 503 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 SMIM35A0A1B0GVV1 85 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 EFCAB8A8MWE9 144 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 KIF28PB7ZC32 967 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 M0QZ92 97 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 MSH4O15457 936 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 DNPH1O43598 174 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 CCNT2O60583 730 aaKnown RBP6.59□□□□□ -1.35
LSM5-203ENST00000409782 TSPAN3O60637 253 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 KIF20AO95235 890 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 LARGE1O95461 756 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 CTDNEP1O95476 244 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 TDP2O95551 362 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 CA3P07451 260 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 ATP1A3P13637 1013 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 INSRRP14616 1297 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 CYP3A7P24462 503 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 RABGGTBP53611 331 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 RRADP55042 308 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 DEFB103AP81534 67 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 MRPS6P82932 125 aaKnown RBP6.59□□□□□ -1.35
LSM5-203ENST00000409782 PIGFQ07326 219 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.59□□□□□ -1.35
LSM5-203ENST00000409782 SLC12A1Q13621 1099 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 SURF1Q15526 300 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 SMAD1Q15797 465 aaKnown RBP6.59□□□□□ -1.35
LSM5-203ENST00000409782 TBR1Q16650 682 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 ME3Q16798 604 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 TCTN1Q2MV58 587 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 MARCH8Q5T0T0 291 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 ATXN7L2Q5T6C5 722 aaPredicted RBP6.59□□□□□ -1.35
LSM5-203ENST00000409782 MANEALQ5VSG8 457 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 LRCH2Q5VUJ6 765 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 NEK8Q86SG6 692 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 LGI4Q8N135 537 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 PDPRQ8NCN5 879 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 NSUN7Q8NE18 718 aaKnown RBP6.59□□□□□ -1.35
LSM5-203ENST00000409782 RDM1Q8NG50 284 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 MAFAQ8NHW3 353 aaPredicted RBP6.59□□□□□ -1.35
LSM5-203ENST00000409782 COG8Q96MW5 612 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 TRAPPC9Q96Q05 1148 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 CHCHD6Q9BRQ6 235 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 TEKT3Q9BXF9 490 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 IFIH1Q9BYX4 1025 aaKnown RBP6.59□□□□□ -1.35
LSM5-203ENST00000409782 IRAK4Q9NWZ3 460 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 NDUFAF4Q9P032 175 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 TBX20Q9UMR3 447 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 DAPP1Q9UN19 280 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 PCDHA10Q9Y5I2 948 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 TRPV2Q9Y5S1 764 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 SQORQ9Y6N5 450 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 SIP14410 1827 aa6.59□□□□□ -1.35
LSM5-203ENST00000409782 PTPRSQ13332 1948 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 COL6A3P12111 3177 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 CDHR4A6H8M9 788 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 FAM90A18PA6NE21 464 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 FAM90A16PA6NEW6 464 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 FAM90A9PA6NNJ1 464 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 FAM90A5PA8MXJ8 464 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 EDIL3O43854 480 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 TMCC2O75069 709 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 PIAS2O75928 621 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 USP1O94782 785 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 GJB5O95377 273 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 FAM90A15PP0C7V4 464 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 FAM90A14PP0C7W9 464 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 GHRP10912 638 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 JUPP14923 745 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 KRT2P35908 639 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 ATXN1P54253 815 aaKnown RBP6.58□□□□□ -1.36
LSM5-203ENST00000409782 LOXL3P58215 753 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 ST3GAL1Q11201 340 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 ZNF568Q3ZCX4 644 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 FAM133BQ5BKY9 247 aaKnown RBP6.58□□□□□ -1.36
LSM5-203ENST00000409782 ZNF484Q5JVG2 852 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 UBXN11Q5T124 520 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 ABLIM2Q6H8Q1 611 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 MTHFD1LQ6UB35 978 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 NECAB1Q8N987 351 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 SLC17A8Q8NDX2 589 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 DBF4BQ8NFT6 615 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 ETNPPLQ8TBG4 499 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 WDR60Q8WVS4 1066 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 ST8SIA4Q92187 359 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 MBD6Q96DN6 1003 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 TCF25Q9BQ70 676 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 GPR63Q9BZJ6 419 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 FAM49AQ9H0Q0 323 aaPredicted RBP6.58□□□□□ -1.36
LSM5-203ENST00000409782 SLC25A32Q9H2D1 315 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 NCDNQ9UBB6 729 aa6.58□□□□□ -1.36
LSM5-203ENST00000409782 DDX25Q9UHL0 483 aaKnown RBP6.58□□□□□ -1.36
LSM5-203ENST00000409782 KCNJ14Q9UNX9 436 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms