RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 TADA1Q96BN2 335 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 CDHR5Q9HBB8 845 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 RNF19AQ9NV58 838 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 E2F8A0AVK6 867 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 PSMD12O00232 456 aaPredicted RBP16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 UBDO15205 165 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 UBTFL6P0CB48 400 aaPredicted RBP16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 TPSB2P20231 275 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 CCNCP24863 283 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 BOP1Q14137 746 aaKnown RBP16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 CYTH1Q15438 398 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 TPSAB1Q15661 275 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 ATAD1Q8NBU5 361 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 NPLOC4Q8TAT6 608 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 RDH11Q8TC12 318 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 ANKRD27Q96NW4 1050 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 TMEM120AQ9BXJ8 343 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 BRD9Q9H8M2 597 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 CFAP97Q9P2B7 532 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 OPTCQ9UBM4 332 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 SHBGP04278 402 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 PCSK2P16519 638 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 NR6A1Q15406 480 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 ATP6AP1LQ52LC2 224 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 LRRC8BQ6P9F7 803 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 IFNEQ86WN2 208 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 CRYBG2Q8N1P7 616 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 NKD2Q969F2 451 aaPredicted RBP16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 EME1Q96AY2 570 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 PLEKHA8Q96JA3 519 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 GOLGA2P5Q9HBQ8 144 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 TXNRD2Q9NNW7 524 aa16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 SETD1AO15047 1707 aaKnown RBP16.99■□□□□ 0.31
PCDHA13-202ENST00000409494 HNRNPCL2B2RXH8 293 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 SKAP2O75563 359 aaPredicted RBP16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 RXRGP48443 463 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 OTOP2Q7RTS6 562 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 RASGEF1CQ8N431 466 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 PDP2Q9P2J9 529 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 SAE1Q9UBE0 346 aaPredicted RBP16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 GNG14A0A1W2PPG7 69 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 MAGEA13PA6NCF6 341 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 DDX6P26196 483 aaKnown RBP eCLIP16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 NDST2P52849 883 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 AUHQ13825 339 aaKnown RBP16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 KPNB1Q14974 876 aaKnown RBP16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 CCL14Q16627 93 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 TEX44Q53QW1 395 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 HGSNATQ68CP4 663 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 ADAMTSL2Q86TH1 951 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 OR52K1Q8NGK4 314 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 PPP1R13LQ8WUF5 828 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 SUSD3Q96L08 255 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 GEMIN8Q9NWZ8 242 aaKnown RBP16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 GMIPQ9P107 970 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 C5orf60A6NFR6 353 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 AKAP10O43572 662 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 CCL5P13501 91 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 TACR2P21452 398 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 RASA2Q15283 850 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 C7orf61Q8IZ16 206 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 CREBZFQ9NS37 354 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 TRMT13Q9NUP7 481 aaKnown RBP16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 CRYL1Q9Y2S2 319 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 BCLAF3A2AJT9 711 aaKnown RBP16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 SNX3O60493 162 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 CCNT2O60583 730 aaKnown RBP16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 EPB42P16452 691 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 GPR1P46091 355 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 DAOAP59103 153 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 BMPR2Q13873 1038 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 MILR1Q7Z6M3 343 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 SCUBE1Q8IWY4 988 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 WFIKKN2Q8TEU8 576 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 ART4Q93070 314 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 CYP4F12Q9HCS2 524 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 SORCS3Q9UPU3 1222 aa16.98■□□□□ 0.31
PCDHA13-202ENST00000409494 PRNPP04156 253 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 BGNP21810 368 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 PPP2R1BP30154 601 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 NOVP48745 357 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 CERS6Q6ZMG9 384 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 HORMAD1Q86X24 394 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 CEP19Q96LK0 163 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 CSPG4P5Q96PW8 444 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 PCDHB18PQ96TA0 734 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 FGFBP2Q9BYJ0 223 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 MIEF1Q9NQG6 463 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 CNTN3Q9P232 1028 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 RGS14O43566 566 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 STAU1O95793 577 aaKnown RBP16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 FECHP22830 423 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 AQP5P55064 265 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 ZBTB17Q13105 803 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 CRY1Q16526 586 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 TRAPPC5Q8IUR0 188 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 JOSD2Q8TAC2 188 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 TTYH3Q9C0H2 523 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 DNTTP04053 509 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms