RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 PDCD7Q8N8D1 485 aaKnown RBP17.11■□□□□ 0.33
SSB-202ENST00000409333 AENQ8WTP8 325 aaKnown RBP17.11■□□□□ 0.33
SSB-202ENST00000409333 EXOC4Q96A65 974 aa17.11■□□□□ 0.33
SSB-202ENST00000409333 OXNAD1Q96HP4 312 aaPredicted RBP17.11■□□□□ 0.33
SSB-202ENST00000409333 EXOC2Q96KP1 924 aa17.11■□□□□ 0.33
SSB-202ENST00000409333 RPL10LQ96L21 214 aaKnown RBP17.11■□□□□ 0.33
SSB-202ENST00000409333 GDAP1L1Q96MZ0 367 aa17.11■□□□□ 0.33
SSB-202ENST00000409333 FMO2Q99518 471 aa17.11■□□□□ 0.33
SSB-202ENST00000409333 KCNK12Q9HB15 430 aa17.11■□□□□ 0.33
SSB-202ENST00000409333 UBP1Q9NZI7 540 aa17.11■□□□□ 0.33
SSB-202ENST00000409333 SEPT3Q9UH03 358 aa17.11■□□□□ 0.33
SSB-202ENST00000409333 FCF1Q9Y324 198 aaKnown RBP17.11■□□□□ 0.33
SSB-202ENST00000409333 E7EVH7 732 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 MT-CYBP00156 380 aaPredicted RBP17.1■□□□□ 0.33
SSB-202ENST00000409333 IL9P15248 144 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 TPSB2P20231 275 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 MAGEA6P43360 314 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 RGRP47804 291 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 SERPINH1P50454 418 aaKnown RBP17.1■□□□□ 0.33
SSB-202ENST00000409333 DSC2Q02487 901 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 CAV1Q03135 178 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 TPSAB1Q15661 275 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 ITPRIPL2Q3MIP1 535 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 MBLAC2Q68D91 279 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 PSKH2Q96QS6 385 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 FCRL5Q96RD9 977 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 FAM129AQ9BZQ8 928 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 SLC27A6Q9Y2P4 619 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 SMAD6O43541 496 aaKnown RBP17.1■□□□□ 0.33
SSB-202ENST00000409333 SOX9P48436 509 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 LMAN1P49257 510 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 NIPAL4Q0D2K0 466 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 OLIG2Q13516 323 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 DMC1Q14565 340 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 IHHQ14623 411 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 INO80DQ53TQ3 878 aaPredicted RBP17.1■□□□□ 0.33
SSB-202ENST00000409333 RNF135Q8IUD6 432 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 PLCD3Q8N3E9 789 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 BBS5Q8N3I7 341 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 PHTF2Q8N3S3 785 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 ANKRD7Q92527 254 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 RBM15Q96T37 977 aaKnown RBP eCLIP17.1■□□□□ 0.33
SSB-202ENST00000409333 MGME1Q9BQP7 344 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 POLR1EQ9GZS1 481 aaKnown RBP17.1■□□□□ 0.33
SSB-202ENST00000409333 DEC1Q9P2X7 70 aa17.1■□□□□ 0.33
SSB-202ENST00000409333 MTRF1LQ9UGC7 380 aaKnown RBP17.1■□□□□ 0.33
SSB-202ENST00000409333 DYNC1I1O14576 645 aa17.09■□□□□ 0.33
SSB-202ENST00000409333 NDC80O14777 642 aa17.09■□□□□ 0.33
SSB-202ENST00000409333 ASGR2P07307 311 aa17.09■□□□□ 0.33
SSB-202ENST00000409333 SRCP12931 536 aa17.09■□□□□ 0.33
SSB-202ENST00000409333 GEMIN4P57678 1058 aaKnown RBP17.09■□□□□ 0.33
SSB-202ENST00000409333 MTM1Q13496 603 aa17.09■□□□□ 0.33
SSB-202ENST00000409333 SPARCL1Q14515 664 aa17.09■□□□□ 0.33
SSB-202ENST00000409333 KCTD11Q693B1 232 aa17.09■□□□□ 0.33
SSB-202ENST00000409333 GRAMD4Q6IC98 578 aa17.09■□□□□ 0.33
SSB-202ENST00000409333 PRPF39Q86UA1 669 aaKnown RBP17.09■□□□□ 0.33
SSB-202ENST00000409333 SFTPA1Q8IWL2 248 aa17.09■□□□□ 0.33
SSB-202ENST00000409333 ZCCHC9Q8N567 271 aaKnown RBP17.09■□□□□ 0.33
SSB-202ENST00000409333 MAFAQ8NHW3 353 aaPredicted RBP17.09■□□□□ 0.33
SSB-202ENST00000409333 ARRDC2Q8TBH0 407 aa17.09■□□□□ 0.33
SSB-202ENST00000409333 CYB5D2Q8WUJ1 264 aa17.09■□□□□ 0.33
SSB-202ENST00000409333 SORCS1Q8WY21 1168 aa17.09■□□□□ 0.33
SSB-202ENST00000409333 NXPE3Q969Y0 559 aa17.09■□□□□ 0.33
SSB-202ENST00000409333 TTC17Q96AE7 1141 aa17.09■□□□□ 0.33
SSB-202ENST00000409333 IMP4Q96G21 291 aaKnown RBP17.09■□□□□ 0.33
SSB-202ENST00000409333 SLC25A51Q9H1U9 297 aa17.09■□□□□ 0.33
SSB-202ENST00000409333 LHX3Q9UBR4 397 aa17.09■□□□□ 0.33
SSB-202ENST00000409333 SLC25A13Q9UJS0 675 aa17.09■□□□□ 0.33
SSB-202ENST00000409333 ERLIN1O75477 346 aa17.08■□□□□ 0.33
SSB-202ENST00000409333 MMP2P08253 660 aa17.08■□□□□ 0.33
SSB-202ENST00000409333 POLR2EP19388 210 aaKnown RBP17.08■□□□□ 0.33
SSB-202ENST00000409333 CD86P42081 329 aa17.08■□□□□ 0.33
SSB-202ENST00000409333 GRIA1P42261 906 aa17.08■□□□□ 0.33
SSB-202ENST00000409333 ECT2LQ008S8 904 aa17.08■□□□□ 0.33
SSB-202ENST00000409333 SULT2A1Q06520 285 aa17.08■□□□□ 0.33
SSB-202ENST00000409333 PRPSAP1Q14558 356 aa17.08■□□□□ 0.33
SSB-202ENST00000409333 ALG1LQ6GMV1 187 aa17.08■□□□□ 0.33
SSB-202ENST00000409333 ZNF534Q76KX8 674 aa17.08■□□□□ 0.33
SSB-202ENST00000409333 ATP11CQ8NB49 1132 aa17.08■□□□□ 0.33
SSB-202ENST00000409333 CSGALNACT1Q8TDX6 532 aa17.08■□□□□ 0.33
SSB-202ENST00000409333 WFIKKN2Q8TEU8 576 aa17.08■□□□□ 0.33
SSB-202ENST00000409333 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.08■□□□□ 0.33
SSB-202ENST00000409333 SEMA3CQ99985 751 aa17.08■□□□□ 0.33
SSB-202ENST00000409333 CIPCQ9C0C6 399 aa17.08■□□□□ 0.33
SSB-202ENST00000409333 EIF2B3Q9NR50 452 aaKnown RBP17.08■□□□□ 0.33
SSB-202ENST00000409333 ARGLU1Q9NWB6 273 aaPredicted RBP17.08■□□□□ 0.33
SSB-202ENST00000409333 HS3ST2Q9Y278 367 aa17.08■□□□□ 0.33
SSB-202ENST00000409333 PRRT4C9JH25 899 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 USP12O75317 370 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 AP2A1O95782 977 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 CR2P20023 1033 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 RHOAP61586 193 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 MAP9Q49MG5 647 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 FNBP1LQ5T0N5 605 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 EMBQ6PCB8 327 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 CCDC25Q86WR0 208 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 KLHDC8BQ8IXV7 354 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 SLC44A3Q8N4M1 653 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 SH2D3CQ8N5H7 860 aa17.07■□□□□ 0.32
SSB-202ENST00000409333 TERB1Q8NA31 727 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms