RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 COQ4Q9Y3A0 265 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 FARP1Q9Y4F1 1045 aaPredicted RBP13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 A0A1W2PQM1 296 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 BLACEA4D250 179 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 K7ERQ8 282 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 TRUB2O95900 331 aaKnown RBP13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 CALCAP01258 141 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 PRNPP04156 253 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 PAEPP09466 180 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 CCKBRP32239 447 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 NEK3P51956 506 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 ADKP55263 362 aaKnown RBP13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 PFN3P60673 137 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 MORC3Q14149 939 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 FBXL22Q6P050 247 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 TMEM270Q6UE05 265 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 CLEC17AQ6ZS10 378 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 ZFAND4Q86XD8 727 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 DTX1Q86Y01 620 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 PHACTR4Q8IZ21 702 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 FAM26EQ8N5C1 309 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 ATP6V0D2Q8N8Y2 350 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 CCDC74AQ96AQ1 378 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 ZNF396Q96N95 335 aaPredicted RBP13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 RPRD1AQ96P16 312 aaPredicted RBP13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 GFM1Q96RP9 751 aaKnown RBP13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 PSMB7Q99436 277 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 FOXJ2Q9P0K8 574 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 PCDHA7Q9UN72 937 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 FADS3Q9Y5Q0 445 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 CREBBPQ92793 2442 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 UNC13CQ8NB66 2214 aa13.13□□□□□ -0.31
CHRNA1-203ENST00000409219 SDK2Q58EX2 2172 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 LRRK1Q38SD2 2015 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 FPGTO14772 594 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 SART1O43290 800 aaKnown RBP13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 SMAD6O43541 496 aaKnown RBP13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 SNAP91O60641 907 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 ANXA6P08133 673 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 ADRB3P13945 408 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 RRM1P23921 792 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 RPL13P26373 211 aaKnown RBP13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 ETV5P41161 510 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 RPL34P49207 117 aaKnown RBP13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 CNGA2Q16280 664 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 ARSIQ5FYB1 569 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 HIST2H2BCQ6DN03 193 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 ESRP1Q6NXG1 681 aaKnown RBP13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 BEND5Q7L4P6 421 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 SDR16C5Q8N3Y7 309 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 ATP11CQ8NB49 1132 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 KYQ8NBH2 561 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 PPP1R16AQ96I34 528 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 TBATAQ96M53 351 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 PPP1R9BQ96SB3 815 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 SRRTQ9BXP5 876 aaKnown RBP13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 CPEB1Q9BZB8 566 aaKnown RBP13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 IGSF5Q9NSI5 407 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 IL36AQ9UHA7 158 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 LOXL2Q9Y4K0 774 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 WASF2Q9Y6W5 498 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 LRP4O75096 1905 aa13.12□□□□□ -0.31
CHRNA1-203ENST00000409219 TMX2-CTNND1H3BSU7 103 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 RNF225M0QZC1 329 aaPredicted RBP13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 YY2O15391 372 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 STX10O60499 249 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 LEFTY1O75610 366 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 RPLP0P05388 317 aaKnown RBP13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 CELA2BP08218 269 aaPredicted RBP13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 TSHRP16473 764 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 GGCXP38435 758 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 CASRP41180 1078 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 CCL7P80098 99 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 LRMPQ12912 555 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 GSE1Q14687 1217 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 C22orf39Q6P5X5 142 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 ARL10Q8N8L6 244 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 FEM1CQ96JP0 617 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 TMEM74Q96NL1 305 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 LENG8Q96PV6 779 aaPredicted RBP13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 MUC3BQ9H195 1237 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 TNKS2Q9H2K2 1166 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 ST7Q9NRC1 585 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 VPS51Q9UID3 782 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 VANGL2Q9ULK5 521 aa13.11□□□□□ -0.31
CHRNA1-203ENST00000409219 AGRPO00253 132 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 AP1G1O43747 822 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 RHOBTB3O94955 611 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 TBXAS1P24557 533 aaPredicted RBP13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 ITGB7P26010 798 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 ME1P48163 572 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 POLE2P56282 527 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 KCNAB2Q13303 367 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 AUHQ13825 339 aaKnown RBP13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 STILQ15468 1287 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 DCAF17Q5H9S7 520 aaPredicted RBP13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 TCERG1LQ5VWI1 586 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 BORAQ6PGQ7 559 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 DPY19L3Q6ZPD9 716 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms