RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 NTAN1Q96AB6 310 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 LENG8Q96PV6 779 aaPredicted RBP12.07□□□□□ -0.48
PCNX4-204ENST00000406949 C11orf84Q9BUA3 381 aaPredicted RBP12.07□□□□□ -0.48
PCNX4-204ENST00000406949 BRD8Q9H0E9 1235 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 GLOD4Q9HC38 313 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 GPAMQ9HCL2 828 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 NSMCE4AQ9NXX6 385 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 RPL26L1Q9UNX3 145 aaKnown RBP12.07□□□□□ -0.48
PCNX4-204ENST00000406949 CRYL1Q9Y2S2 319 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 A0A1W2PQH9 124 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 RAG1P15918 1043 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 ACADSP16219 412 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 SOX11P35716 441 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 RPL14P50914 215 aaKnown RBP12.06□□□□□ -0.48
PCNX4-204ENST00000406949 FLOT2Q14254 428 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 ZNF235Q14590 738 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 INSCQ1MX18 579 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 KIF19Q2TAC6 998 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 ZNF280DQ6N043 979 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 NEPROQ6NW34 567 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 DCLRE1AQ6PJP8 1040 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 AGMOQ6ZNB7 445 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 CDRT15Q96T59 188 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 TRIM62Q9BVG3 475 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 SLC39A8Q9C0K1 460 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 CCDC68Q9H2F9 335 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 RHOJQ9H4E5 214 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 POMKQ9H5K3 350 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 EME2A4GXA9 379 aaPredicted RBP12.06□□□□□ -0.48
PCNX4-204ENST00000406949 DPPA5A6NC42 116 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 TPD52L2O43399 206 aaKnown RBP12.06□□□□□ -0.48
PCNX4-204ENST00000406949 MAGEC1O60732 1142 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 APOA4P06727 396 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 KLF10Q13118 480 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 BLMHQ13867 455 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 MAPRE1Q15691 268 aaKnown RBP12.06□□□□□ -0.48
PCNX4-204ENST00000406949 ANO7Q6IWH7 933 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 NAPRTQ6XQN6 538 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 SNX31Q8N9S9 440 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 PIP4K2CQ8TBX8 421 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 PPWD1Q96BP3 646 aaKnown RBP12.06□□□□□ -0.48
PCNX4-204ENST00000406949 ZNF333Q96JL9 665 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 ABCC13Q9NSE7 274 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 TMLHEQ9NVH6 421 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 GIT1Q9Y2X7 761 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 DOCK3Q8IZD9 2030 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 ARHGEF37A1IGU5 675 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 AP3B1O00203 1094 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 SOAT2O75908 522 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 ALDH1A2O94788 518 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 SUPT7LO94864 414 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 C1QAP02745 245 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 GRK4P32298 578 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 CSE1LP55060 971 aaKnown RBP12.06□□□□□ -0.48
PCNX4-204ENST00000406949 WNT3AP56704 352 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 CYLC2Q14093 348 aaPredicted RBP12.06□□□□□ -0.48
PCNX4-204ENST00000406949 PPM1LQ5SGD2 360 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 FRMD7Q6ZUT3 714 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 FSTL5Q8N475 847 aaPredicted RBP12.06□□□□□ -0.48
PCNX4-204ENST00000406949 GALNT4Q8N4A0 578 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 ENDOVQ8N8Q3 282 aaKnown RBP12.06□□□□□ -0.48
PCNX4-204ENST00000406949 CASP10Q92851 521 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 CCDC106Q9BWC9 280 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 FBXO5Q9UKT4 447 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 PCDHB12Q9Y5F1 795 aa12.06□□□□□ -0.48
PCNX4-204ENST00000406949 TRIP12Q14669 1992 aaPredicted RBP12.05□□□□□ -0.48
PCNX4-204ENST00000406949 TMEM233B4DJY2 109 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 C9IYK1 514 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 HDAC3O15379 428 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 AHSGP02765 367 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 THRAP10827 490 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 ABL2P42684 1182 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 PAPOLAP51003 745 aaKnown RBP12.05□□□□□ -0.48
PCNX4-204ENST00000406949 GJA9P57773 515 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 MRPS22P82650 360 aaKnown RBP12.05□□□□□ -0.48
PCNX4-204ENST00000406949 FAM83EQ2M2I3 478 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 MARC1Q5VT66 337 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 PKN3Q6P5Z2 889 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 RPS27LQ71UM5 84 aaKnown RBP12.05□□□□□ -0.48
PCNX4-204ENST00000406949 CIR1Q86X95 450 aaPredicted RBP12.05□□□□□ -0.48
PCNX4-204ENST00000406949 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.05□□□□□ -0.48
PCNX4-204ENST00000406949 RCN3Q96D15 328 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 SIKE1Q9BRV8 207 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 UBE2OQ9C0C9 1292 aaKnown RBP12.05□□□□□ -0.48
PCNX4-204ENST00000406949 IL1RL2Q9HB29 575 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 CASS4Q9NQ75 786 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 MKS1Q9NXB0 559 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 I6L893 689 aaPredicted RBP12.05□□□□□ -0.48
PCNX4-204ENST00000406949 ITGB1P05556 798 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 RPL9P32969 192 aaKnown RBP12.05□□□□□ -0.48
PCNX4-204ENST00000406949 CASP2P42575 452 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 CXCR3P49682 368 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 AIF1P55008 147 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 RAB10P61026 200 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 GALNT2Q10471 571 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 PRKAA1Q13131 559 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 PSMD5Q16401 504 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 LIPMQ5VYY2 423 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 SHKBP1Q8TBC3 707 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 FBXO32Q969P5 355 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms