RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 PRRT4C9JH25 899 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 UPK3BL2E5RIL1 263 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 K7EQS6 105 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 CBX4O00257 560 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 APOL1O14791 398 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 PRB1P04280 392 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 CFIP05156 583 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 SRPRAP08240 638 aaKnown RBP10.77□□□□□ -0.69
RPAIN-204ENST00000405578 CD48P09326 243 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 MX2P20592 715 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 AMPD1P23109 780 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 MZF1P28698 734 aaPredicted RBP10.77□□□□□ -0.69
RPAIN-204ENST00000405578 ARSEP51690 589 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 ATXN3P54252 364 aaPredicted RBP10.77□□□□□ -0.69
RPAIN-204ENST00000405578 SEC13P55735 322 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 PPP2R5EQ16537 467 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 FUT11Q495W5 492 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 FNDC3BQ53EP0 1204 aaKnown RBP10.77□□□□□ -0.69
RPAIN-204ENST00000405578 C2orf27AQ580R0 203 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 TFDP3Q5H9I0 405 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 ZNF569Q5MCW4 686 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 EOGTQ5NDL2 527 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 SPOCD1Q6ZMY3 1216 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 LPCAT2Q7L5N7 544 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 KIAA0907Q7Z7F0 614 aaPredicted RBP10.77□□□□□ -0.69
RPAIN-204ENST00000405578 METTL3Q86U44 580 aaKnown RBP10.77□□□□□ -0.69
RPAIN-204ENST00000405578 ADIPOR2Q86V24 386 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 RASSF3Q86WH2 238 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 RFX6Q8HWS3 928 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 REXO1L1PQ8IX06 675 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 TMEFF1Q8IYR6 380 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 KDM1BQ8NB78 822 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 MDGA1Q8NFP4 955 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 WFDC5Q8TCV5 224 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 NSMCE1Q8WV22 266 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 KRT35Q92764 455 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 TTC17Q96AE7 1141 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 FAF2Q96CS3 445 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 RNF157Q96PX1 679 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 TMEM74BQ9NUR3 256 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 HAUS2Q9NVX0 235 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 CACNA2D2Q9NY47 1150 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 NEU3Q9UQ49 428 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 TENM4Q6N022 2769 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 MYOFQ9NZM1 2061 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 GOLGA4Q13439 2230 aaKnown RBP10.76□□□□□ -0.69
RPAIN-204ENST00000405578 A0A0D9SEW6 157 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 CYSRT1A8MQ03 144 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 RASA4BC9J798 803 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 DFFAO00273 331 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 RASA4O43374 803 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 SYNCRIPO60506 623 aaKnown RBP10.76□□□□□ -0.69
RPAIN-204ENST00000405578 TJP3O95049 919 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 HNRNPLP14866 589 aaKnown RBP eCLIP10.76□□□□□ -0.69
RPAIN-204ENST00000405578 IL4RP24394 825 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 NTSR1P30989 418 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 TIE1P35590 1138 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 CDKN2BP42772 138 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 PTGER3P43115 390 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 MARCKSL1P49006 195 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 NR2C2P49116 596 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 PEX5P50542 639 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 DNA2P51530 1060 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 CLCN6P51797 869 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 C19orf57Q0VDD7 668 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 MMRN1Q13201 1228 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 STARD3Q14849 445 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 SEL1L2Q5TEA6 688 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 MEI1Q5TIA1 1274 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 KAZNQ674X7 775 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 SLC23A3Q6PIS1 610 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 MFSD7Q6UXD7 560 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 SERPINA13PQ6UXR4 307 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 SYT12Q8IV01 421 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 APCDD1Q8J025 514 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 ATP11CQ8NB49 1132 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 OR7D4Q8NG98 312 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 PCDH19Q8TAB3 1148 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 USP33Q8TEY7 942 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 RLN3Q8WXF3 142 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 ARHGEF2Q92974 986 aaKnown RBP10.76□□□□□ -0.69
RPAIN-204ENST00000405578 HES6Q96HZ4 224 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 CELF6Q96J87 481 aaKnown RBP10.76□□□□□ -0.69
RPAIN-204ENST00000405578 LMLNQ96KR4 655 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 CCDC114Q96M63 670 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 SP110Q9HB58 689 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 KCND1Q9NSA2 647 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 THAP10Q9P2Z0 257 aaPredicted RBP10.76□□□□□ -0.69
RPAIN-204ENST00000405578 ZNF212Q9UDV6 495 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 SUN2Q9UH99 717 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 PACSIN2Q9UNF0 486 aaPredicted RBP10.76□□□□□ -0.69
RPAIN-204ENST00000405578 EFR3BQ9Y2G0 817 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 RAD54BQ9Y620 910 aa10.76□□□□□ -0.69
RPAIN-204ENST00000405578 ANTXRLA6NF34 631 aa10.75□□□□□ -0.69
RPAIN-204ENST00000405578 C3orf70A6NLC5 250 aaPredicted RBP10.75□□□□□ -0.69
RPAIN-204ENST00000405578 KCNK3O14649 394 aa10.75□□□□□ -0.69
RPAIN-204ENST00000405578 KDELR3O43731 214 aa10.75□□□□□ -0.69
RPAIN-204ENST00000405578 OPHN1O60890 802 aa10.75□□□□□ -0.69
RPAIN-204ENST00000405578 KLF8O95600 359 aaPredicted RBP10.75□□□□□ -0.69
RPAIN-204ENST00000405578 TGM2P21980 687 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms