RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PPP6CO00743 305 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 TP73O15350 636 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 TSPAN3O60637 253 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 SGPL1O95470 568 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 TUBB4AP04350 444 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 HNRNPA1P09651 372 aaKnown RBP eCLIP5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 HOXB9P17482 250 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 CD72P21854 359 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 GSTM2P28161 218 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 EPHB2P29323 1055 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 LIFRP42702 1097 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 ARHGAP8P85298 464 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 CFHR1Q03591 330 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 SMN1Q16637 294 aaKnown RBP5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 AP5B1Q2VPB7 878 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 EARS2Q5JPH6 523 aaKnown RBP5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 KIAA1755Q5JYT7 1200 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 WDR45BQ5MNZ6 344 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 JAKMIP3Q5VZ66 844 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 ANO7Q6IWH7 933 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 CNGA4Q8IV77 575 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 BRSK2Q8IWQ3 736 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 TMEM217Q8N7C4 229 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 KCNH5Q8NCM2 988 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 PHF7Q9BWX1 381 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 FRMD8Q9BZ67 464 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 MROH8Q9H579 483 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 SLITRK6Q9H5Y7 841 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 ERVK-5Q9HDB9 667 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 WASH6PQ9NQA3 447 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 HDAC6Q9UBN7 1215 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 POLKQ9UBT6 870 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 AFG3L2Q9Y4W6 797 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 COL3A1P02461 1466 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 METTL18O95568 372 aa5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 WEE2P0C1S8 567 aa5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 ATP5F1P24539 256 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 RPS6KA3P51812 740 aa5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 NANOS3P60323 173 aaKnown RBP5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 RHAGQ02094 409 aa5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 MAPK7Q13164 816 aa5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 BYSLQ13895 437 aaKnown RBP5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 SEMA3AQ14563 771 aa5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 C10orf76Q5T2E6 689 aa5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 UBAP2Q5T6F2 1119 aaKnown RBP5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 YTHDF3Q7Z739 585 aaKnown RBP5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 GALNT7Q86SF2 657 aa5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 DNAJC10Q8IXB1 793 aa5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 ADGRF4Q8IZF3 695 aa5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 LRRC59Q96AG4 307 aaKnown RBP5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 CFAP53Q96M91 514 aa5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 FAM118BQ9BPY3 351 aa5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 Q9N2J8 555 aa5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 FLRT1Q9NZU1 646 aa5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 UPB1Q9UBR1 384 aa5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 CD207Q9UJ71 328 aa5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 SLC8A2Q9UPR5 921 aa5.4□□□□□ -1.54
HMGB3P19-201ENST00000403971 RTL1A6NKG5 1358 aa5.4□□□□□ -1.55
HMGB3P19-201ENST00000403971 RGPD1P0DJD0 1748 aa5.4□□□□□ -1.55
HMGB3P19-201ENST00000403971 RGPD2P0DJD1 1756 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 DLG5Q8TDM6 1919 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 CGB1A6NKQ9 187 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 A6NLC8 198 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 KCNJ18B7U540 433 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 UGDHO60701 494 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 NFATC1O95644 943 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 WNT1P04628 370 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 ATP1A3P13637 1013 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 TNNT1P13805 278 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 XBP1P17861 261 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 TFEBP19484 476 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 G3BP1Q13283 466 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 STIM1Q13586 685 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 CCDC184Q52MB2 194 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 SLC9C2Q5TAH2 1124 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 NAPEPLDQ6IQ20 393 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 SLC18B1Q6NT16 456 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 SLC2A7Q6PXP3 512 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 KLBQ86Z14 1044 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 FAM47BQ8NA70 645 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 WIPF2Q8TF74 440 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 RRP36Q96EU6 259 aaKnown RBP5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 CRAMP1Q96RY5 1269 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 PIMREGQ9BSJ6 248 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 TTYH1Q9H313 450 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 PTGFRNQ9P2B2 879 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 IPO11Q9UI26 975 aaKnown RBP5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 TNFSF13BQ9Y275 285 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 CPDO75976 1380 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 FLT4P35916 1363 aa5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 VIRMAQ69YN4 1812 aaKnown RBP5.39□□□□□ -1.55
HMGB3P19-201ENST00000403971 LMO7Q8WWI1 1683 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 CAMTA1Q9Y6Y1 1673 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 NWD2Q9ULI1 1742 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 COL14A1Q05707 1796 aaKnown RBP5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 FAM90A7PA6NKC0 464 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 SH2D7A6NKC9 451 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 FAM90A22PA8MWA6 464 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms