RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 HARS2P49590 506 aaKnown RBP17.32■□□□□ 0.36
PTPRA-205ENST00000399903 BFSP2Q13515 415 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 FAM47CQ5HY64 1035 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 CARM1Q86X55 608 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 SPNS2Q8IVW8 549 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 CCNYQ8ND76 341 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 CNDP1Q96KN2 507 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 NIFKQ9BYG3 293 aaKnown RBP17.32■□□□□ 0.36
PTPRA-205ENST00000399903 SLC39A10Q9ULF5 831 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 PADI4Q9UM07 663 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 EVPLQ92817 2033 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 SYNJ2BP-COX16A0A087WUM0 186 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 KPNA7A9QM74 516 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 HDAC3O15379 428 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 MT-ND1P03886 318 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 EDNRBP24530 442 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 EEF1DP29692 281 aaKnown RBP17.31■□□□□ 0.36
PTPRA-205ENST00000399903 GRIA4P48058 902 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 CD151P48509 253 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 CHSY3Q70JA7 882 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 CXorf38Q8TB03 319 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 HEXIM2Q96MH2 286 aaKnown RBP17.31■□□□□ 0.36
PTPRA-205ENST00000399903 AGAP2Q99490 1192 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 OMDQ99983 421 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 FRMD8Q9BZ67 464 aaPredicted RBP17.31■□□□□ 0.36
PTPRA-205ENST00000399903 DRC3Q9H069 523 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 COX16Q9P0S2 106 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 FAM32AQ9Y421 112 aaKnown RBP17.31■□□□□ 0.36
PTPRA-205ENST00000399903 LOXHD1Q8IVV2 1947 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 IGKV6D-21A0A0A0MT36 114 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 TRIM38O00635 465 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 PHGDHO43175 533 aaKnown RBP17.31■□□□□ 0.36
PTPRA-205ENST00000399903 TFEBP19484 476 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 RAB39AQ14964 217 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 CELF3Q5SZQ8 465 aaKnown RBP17.31■□□□□ 0.36
PTPRA-205ENST00000399903 METTL21CQ5VZV1 264 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 ZNF534Q76KX8 674 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 LYSMD3Q7Z3D4 306 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 PCDH19Q8TAB3 1148 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 ZNF669Q96BR6 464 aaPredicted RBP17.31■□□□□ 0.36
PTPRA-205ENST00000399903 SLX1AQ9BQ83 275 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 EFHD1Q9BUP0 239 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 EGFL7Q9UHF1 273 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 ZDHHC2Q9UIJ5 367 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 ASS1P00966 412 aaKnown RBP17.31■□□□□ 0.36
PTPRA-205ENST00000399903 PRKCGP05129 697 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 ZNF12P17014 697 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 PAX3P23760 479 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 TXNL4AP83876 142 aaKnown RBP17.31■□□□□ 0.36
PTPRA-205ENST00000399903 MAPK11Q15759 364 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 CANT1Q8WVQ1 401 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 APBB2Q92870 758 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 ZNF597Q96LX8 424 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 APOL2Q9BQE5 337 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 SMOXQ9NWM0 555 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 ZNHIT2Q9UHR6 403 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 CNOT6Q9ULM6 557 aaKnown RBP17.31■□□□□ 0.36
PTPRA-205ENST00000399903 MFHAS1Q9Y4C4 1052 aa17.31■□□□□ 0.36
PTPRA-205ENST00000399903 TOR1BO14657 336 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 GPD1P21695 349 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 RPL14P50914 215 aaKnown RBP17.3■□□□□ 0.36
PTPRA-205ENST00000399903 TSPY1Q01534 308 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 AGKQ53H12 422 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 KCTD8Q6ZWB6 473 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 IFNEQ86WN2 208 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 SYT17Q9BSW7 474 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 HERC2P3Q9BVR0 1158 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 MRPL4Q9BYD3 311 aaKnown RBP17.3■□□□□ 0.36
PTPRA-205ENST00000399903 SPON1Q9HCB6 807 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 SYBUQ9NX95 663 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 HMGXB4Q9UGU5 601 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 CNOT3O75175 753 aaKnown RBP17.3■□□□□ 0.36
PTPRA-205ENST00000399903 IDO1P14902 403 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 GLDCP23378 1020 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 USP41Q3LFD5 358 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 SLFN12LQ6IEE8 588 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 DNAAF3Q8N9W5 541 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 RPL10LQ96L21 214 aaKnown RBP17.3■□□□□ 0.36
PTPRA-205ENST00000399903 TSNARE1Q96NA8 513 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 LGMNQ99538 433 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 NMRAL1Q9HBL8 299 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 ZFYVE28Q9HCC9 887 aa17.3■□□□□ 0.36
PTPRA-205ENST00000399903 COPG1Q9Y678 874 aaKnown RBP17.3■□□□□ 0.36
PTPRA-205ENST00000399903 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.29■□□□□ 0.36
PTPRA-205ENST00000399903 CLOCKO15516 846 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 BCL10O95999 233 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 ADCYAP1R1P41586 468 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 ATXN1P54253 815 aaKnown RBP17.29■□□□□ 0.36
PTPRA-205ENST00000399903 TRIM25Q14258 630 aaKnown RBP17.29■□□□□ 0.36
PTPRA-205ENST00000399903 PGS1Q32NB8 556 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 ZNF618Q5T7W0 954 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 ALDH16A1Q8IZ83 802 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 AKT3Q9Y243 479 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 TMED5Q9Y3A6 229 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 ADGRA2Q96PE1 1338 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.29■□□□□ 0.36
PTPRA-205ENST00000399903 A0A087WZ62 844 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 C9JVG2 144 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 H0YCG3 227 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 ACOT8O14734 319 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms