RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 CCDC59Q9P031 241 aaKnown RBP11.76□□□□□ -0.53
HLCS-202ENST00000399120 GNPTGQ9UJJ9 305 aa11.76□□□□□ -0.53
HLCS-202ENST00000399120 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.76□□□□□ -0.53
HLCS-202ENST00000399120 C15orf41Q9Y2V0 281 aa11.76□□□□□ -0.53
HLCS-202ENST00000399120 CAPN6Q9Y6Q1 641 aa11.76□□□□□ -0.53
HLCS-202ENST00000399120 PIGNO95427 931 aa11.76□□□□□ -0.53
HLCS-202ENST00000399120 MNDAP41218 407 aa11.76□□□□□ -0.53
HLCS-202ENST00000399120 PTENP60484 403 aa11.76□□□□□ -0.53
HLCS-202ENST00000399120 ACTR3P61158 418 aa11.76□□□□□ -0.53
HLCS-202ENST00000399120 BTN3A2P78410 334 aa11.76□□□□□ -0.53
HLCS-202ENST00000399120 ISLR2Q6UXK2 745 aa11.76□□□□□ -0.53
HLCS-202ENST00000399120 FAM98AQ8NCA5 519 aaKnown RBP11.76□□□□□ -0.53
HLCS-202ENST00000399120 ATL1Q8WXF7 558 aa11.76□□□□□ -0.53
HLCS-202ENST00000399120 CXorf40BQ96DE9 158 aa11.76□□□□□ -0.53
HLCS-202ENST00000399120 CCDC177Q9NQR7 707 aaPredicted RBP11.76□□□□□ -0.53
HLCS-202ENST00000399120 ZNF214Q9UL59 606 aaPredicted RBP11.76□□□□□ -0.53
HLCS-202ENST00000399120 PSMD13Q9UNM6 376 aa11.76□□□□□ -0.53
HLCS-202ENST00000399120 ARHGEF33A8MVX0 844 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 YBX3P16989 372 aaKnown RBP eCLIP11.75□□□□□ -0.53
HLCS-202ENST00000399120 MMP13P45452 471 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 GMPSP49915 693 aaPredicted RBP11.75□□□□□ -0.53
HLCS-202ENST00000399120 ATN1P54259 1190 aaPredicted RBP11.75□□□□□ -0.53
HLCS-202ENST00000399120 HKDC1Q2TB90 917 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 SPATA20Q8TB22 786 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 TBCBQ99426 244 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 FUT8Q9BYC5 575 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 MORF4L1Q9UBU8 362 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 TSPAN16Q9UKR8 245 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 DHRS7Q9Y394 339 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 EFCAB6Q5THR3 1501 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 ABHD14A-ACY1A0A1B0GW23 586 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 MICAL2O94851 1124 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 SEMA3DO95025 777 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 RLN1P04808 185 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 VIL1P09327 827 aaKnown RBP11.75□□□□□ -0.53
HLCS-202ENST00000399120 MYBL2P10244 700 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 RPA3P35244 121 aaPredicted RBP11.75□□□□□ -0.53
HLCS-202ENST00000399120 RAB27AP51159 221 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.75□□□□□ -0.53
HLCS-202ENST00000399120 ARHGAP36Q6ZRI8 547 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 OR10H5Q8NGA6 315 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 SEMA4AQ9H3S1 761 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 SNTG2Q9NY99 539 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 TIMM13Q9Y5L4 95 aaPredicted RBP11.75□□□□□ -0.53
HLCS-202ENST00000399120 SLC37A4O43826 429 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 OR10H3O60404 316 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 PSMG1O95456 288 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 PRKAR2AP13861 404 aaKnown RBP11.75□□□□□ -0.53
HLCS-202ENST00000399120 GRIA3P42263 894 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 VBP1P61758 197 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 PPP2R2BQ00005 443 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 GRB10Q13322 594 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 SQLEQ14534 574 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 DET1Q7L5Y6 550 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 ENGASEQ8NFI3 743 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 ERLEC1Q96DZ1 483 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 KLHL32Q96NJ5 620 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 DEFB129Q9H1M3 183 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 KCNN2Q9H2S1 579 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 SLC12A4Q9UP95 1085 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 DUSP10Q9Y6W6 482 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 LDOC1O95751 146 aaPredicted RBP11.75□□□□□ -0.53
HLCS-202ENST00000399120 FAM86B2P0C5J1 330 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 GCLCP48506 637 aaPredicted RBP11.75□□□□□ -0.53
HLCS-202ENST00000399120 CEBPGP53567 150 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 IL18R1Q13478 541 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 PFKFB4Q16877 469 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 BICRALQ6AI39 1079 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 GCNT7Q6ZNI0 430 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 ABRAQ8N0Z2 381 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 PIGKQ92643 395 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 TTLL2Q9BWV7 592 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 POLR1EQ9GZS1 481 aaKnown RBP11.75□□□□□ -0.53
HLCS-202ENST00000399120 PCDH12Q9NPG4 1184 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 MTF2Q9Y483 593 aaPredicted RBP11.75□□□□□ -0.53
HLCS-202ENST00000399120 MAGI2Q86UL8 1455 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 TRDMT1O14717 391 aaKnown RBP11.75□□□□□ -0.53
HLCS-202ENST00000399120 IFNGP01579 166 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 GALNT3Q14435 633 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 FBXO16Q8IX29 292 aaPredicted RBP11.75□□□□□ -0.53
HLCS-202ENST00000399120 STAG3L4Q8TBR4 150 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 GPER1Q99527 375 aa11.75□□□□□ -0.53
HLCS-202ENST00000399120 GPN3Q9UHW5 284 aaPredicted RBP11.75□□□□□ -0.53
HLCS-202ENST00000399120 SLC28A1O00337 649 aa11.74□□□□□ -0.53
HLCS-202ENST00000399120 MDM4O15151 490 aa11.74□□□□□ -0.53
HLCS-202ENST00000399120 CXCL8P10145 99 aa11.74□□□□□ -0.53
HLCS-202ENST00000399120 SSTR1P30872 391 aa11.74□□□□□ -0.53
HLCS-202ENST00000399120 FAAP100Q0VG06 881 aa11.74□□□□□ -0.53
HLCS-202ENST00000399120 SMU1Q2TAY7 513 aa11.74□□□□□ -0.53
HLCS-202ENST00000399120 RFX4Q33E94 735 aa11.74□□□□□ -0.53
HLCS-202ENST00000399120 FAM171A1Q5VUB5 890 aa11.74□□□□□ -0.53
HLCS-202ENST00000399120 PAPD7Q5XG87 772 aaKnown RBP11.74□□□□□ -0.53
HLCS-202ENST00000399120 CLEC17AQ6ZS10 378 aa11.74□□□□□ -0.53
HLCS-202ENST00000399120 TAS1R2Q8TE23 839 aa11.74□□□□□ -0.53
HLCS-202ENST00000399120 PGLYRP2Q96PD5 576 aa11.74□□□□□ -0.53
HLCS-202ENST00000399120 NECTIN3Q9NQS3 549 aa11.74□□□□□ -0.53
HLCS-202ENST00000399120 LEF1Q9UJU2 399 aaPredicted RBP11.74□□□□□ -0.53
HLCS-202ENST00000399120 WBP11Q9Y2W2 641 aaKnown RBP11.74□□□□□ -0.53
HLCS-202ENST00000399120 A0A0B4J269 797 aa11.74□□□□□ -0.53
HLCS-202ENST00000399120 SLC26A2P50443 739 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms