RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 OR12D3Q9UGF7 316 aa25.96■■□□□ 1.75
COL13A1-203ENST00000398969 RUVBL2Q9Y230 463 aaKnown RBP25.96■■□□□ 1.75
COL13A1-203ENST00000398969 FAM155AB1AL88 458 aaPredicted RBP25.95■■□□□ 1.75
COL13A1-203ENST00000398969 SNUPNO95149 360 aaKnown RBP25.95■■□□□ 1.75
COL13A1-203ENST00000398969 IGHA2P01877 340 aa25.95■■□□□ 1.75
COL13A1-203ENST00000398969 AVPR1AP37288 418 aa25.95■■□□□ 1.75
COL13A1-203ENST00000398969 CYLC2Q14093 348 aaPredicted RBP25.95■■□□□ 1.75
COL13A1-203ENST00000398969 PRPSAP1Q14558 356 aa25.95■■□□□ 1.75
COL13A1-203ENST00000398969 MFSD10Q14728 455 aa25.95■■□□□ 1.75
COL13A1-203ENST00000398969 PDK3Q15120 406 aa25.95■■□□□ 1.75
COL13A1-203ENST00000398969 RAB41Q5JT25 222 aa25.95■■□□□ 1.75
COL13A1-203ENST00000398969 FBXL19Q6PCT2 694 aa25.95■■□□□ 1.75
COL13A1-203ENST00000398969 SOCS4Q8WXH5 440 aa25.95■■□□□ 1.75
COL13A1-203ENST00000398969 DTNAQ9Y4J8 743 aa25.95■■□□□ 1.75
COL13A1-203ENST00000398969 AP3B1O00203 1094 aa25.95■■□□□ 1.74
COL13A1-203ENST00000398969 TNPO2O14787 897 aaKnown RBP25.95■■□□□ 1.74
COL13A1-203ENST00000398969 DDHD2O94830 711 aa25.95■■□□□ 1.74
COL13A1-203ENST00000398969 LRIG2O94898 1065 aa25.95■■□□□ 1.74
COL13A1-203ENST00000398969 FAM163BP0C2L3 166 aa25.95■■□□□ 1.74
COL13A1-203ENST00000398969 GABRB3P28472 473 aa25.95■■□□□ 1.74
COL13A1-203ENST00000398969 THOP1P52888 689 aa25.95■■□□□ 1.74
COL13A1-203ENST00000398969 NSUN2Q08J23 767 aaKnown RBP eCLIP25.95■■□□□ 1.74
COL13A1-203ENST00000398969 CRHR2Q13324 411 aa25.95■■□□□ 1.74
COL13A1-203ENST00000398969 SLC12A1Q13621 1099 aa25.95■■□□□ 1.74
COL13A1-203ENST00000398969 BNC2Q6ZN30 1099 aaPredicted RBP25.95■■□□□ 1.74
COL13A1-203ENST00000398969 OTOP3Q7RTS5 596 aa25.95■■□□□ 1.74
COL13A1-203ENST00000398969 LCA5Q86VQ0 697 aa25.95■■□□□ 1.74
COL13A1-203ENST00000398969 CENPLQ8N0S6 344 aaPredicted RBP25.95■■□□□ 1.74
COL13A1-203ENST00000398969 LSMEM2Q8N112 164 aa25.95■■□□□ 1.74
COL13A1-203ENST00000398969 STON2Q8WXE9 905 aa25.95■■□□□ 1.74
COL13A1-203ENST00000398969 CELF6Q96J87 481 aaKnown RBP25.95■■□□□ 1.74
COL13A1-203ENST00000398969 CDRT15Q96T59 188 aa25.95■■□□□ 1.74
COL13A1-203ENST00000398969 TKTL2Q9H0I9 626 aa25.95■■□□□ 1.74
COL13A1-203ENST00000398969 VPS28Q9UK41 221 aa25.95■■□□□ 1.74
COL13A1-203ENST00000398969 CAPN8A6NHC0 703 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 TARM1B6A8C7 271 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 CLGNO14967 610 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 CPT1AP50416 773 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 FOLH1Q04609 750 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 RBBP5Q15291 538 aaKnown RBP25.94■■□□□ 1.74
COL13A1-203ENST00000398969 SETD3Q86TU7 594 aaPredicted RBP25.94■■□□□ 1.74
COL13A1-203ENST00000398969 FSTL5Q8N475 847 aaPredicted RBP25.94■■□□□ 1.74
COL13A1-203ENST00000398969 CNTD1Q8N815 330 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 EDEM1Q92611 657 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 RCN3Q96D15 328 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 PCED1BQ96HM7 432 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 ZFP42Q96MM3 310 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 PPP1R10Q96QC0 940 aaKnown RBP25.94■■□□□ 1.74
COL13A1-203ENST00000398969 WDCPQ9H6R7 721 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 CACNG4Q9UBN1 327 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 VTI1BQ9UEU0 232 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 CDYLQ9Y232 598 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 TXNDC9O14530 226 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 AHSGP02765 367 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 GRIA2P42262 883 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 CXCR3P49682 368 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 ZNF423Q2M1K9 1284 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 PIGGQ5H8A4 983 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 TMEM198Q66K66 360 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 UGT2A3Q6UWM9 527 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 LINC00523Q86TU6 105 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 SLC41A1Q8IVJ1 513 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.94■■□□□ 1.74
COL13A1-203ENST00000398969 NCSTNQ92542 709 aa25.94■■□□□ 1.74
COL13A1-203ENST00000398969 NUP205Q92621 2012 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 MYBPHLA2RUH7 354 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 F9P00740 461 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 JUNP05412 331 aaKnown RBP25.93■■□□□ 1.74
COL13A1-203ENST00000398969 DNAJB2P25686 324 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 ZNF135P52742 658 aaPredicted RBP25.93■■□□□ 1.74
COL13A1-203ENST00000398969 ADAM17P78536 824 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 LRRC8EQ6NSJ5 796 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 BHLHA9Q7RTU4 235 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 SENP8Q96LD8 212 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 CATSPER2Q96P56 530 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 GCNAQ96QF7 691 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 Q9Y3F1 56 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 SLCO1B7G3V0H7 640 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 HAS3O00219 553 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 XRCC1P18887 633 aaPredicted RBP25.93■■□□□ 1.74
COL13A1-203ENST00000398969 ADSLP30566 484 aaPredicted RBP25.93■■□□□ 1.74
COL13A1-203ENST00000398969 PSEN2P49810 448 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 CHN2P52757 468 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 FLOT2Q14254 428 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 KLHDC8BQ8IXV7 354 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 USP33Q8TEY7 942 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 DCUN1D1Q96GG9 259 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 AP5M1Q9H0R1 490 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 RRN3Q9NYV6 651 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 TLL2Q9Y6L7 1015 aa25.93■■□□□ 1.74
COL13A1-203ENST00000398969 TREHO43280 583 aa25.92■■□□□ 1.74
COL13A1-203ENST00000398969 DLX3O60479 287 aa25.92■■□□□ 1.74
COL13A1-203ENST00000398969 COL6A2P12110 1019 aa25.92■■□□□ 1.74
COL13A1-203ENST00000398969 CTGFP29279 349 aa25.92■■□□□ 1.74
COL13A1-203ENST00000398969 RAB27AP51159 221 aa25.92■■□□□ 1.74
COL13A1-203ENST00000398969 BEX3Q00994 111 aa25.92■■□□□ 1.74
COL13A1-203ENST00000398969 HERC3Q15034 1050 aa25.92■■□□□ 1.74
COL13A1-203ENST00000398969 AP1ARQ63HQ0 302 aa25.92■■□□□ 1.74
COL13A1-203ENST00000398969 PIP4K2CQ8TBX8 421 aa25.92■■□□□ 1.74
COL13A1-203ENST00000398969 XPR1Q9UBH6 696 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms