RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 BTBD9Q96Q07 612 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 CDRT15Q96T59 188 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 TBL1YQ9BQ87 522 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 SLC38A7Q9NVC3 462 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 XPR1Q9UBH6 696 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 CACNG4Q9UBN1 327 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 GRID2O43424 1007 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 AHSGP02765 367 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 COL6A2P12110 1019 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 ENO3P13929 434 aaPredicted RBP13.29□□□□□ -0.28
PRAME-201ENST00000398741 STMN1P16949 149 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 PGGT1BP53609 377 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 ART3Q13508 389 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 POU6F1Q14863 301 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 PDCD2Q16342 344 aaPredicted RBP13.29□□□□□ -0.28
PRAME-201ENST00000398741 RARS2Q5T160 578 aaKnown RBP13.29□□□□□ -0.28
PRAME-201ENST00000398741 OGFRL1Q5TC84 451 aaPredicted RBP13.29□□□□□ -0.28
PRAME-201ENST00000398741 AP1ARQ63HQ0 302 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 PKN3Q6P5Z2 889 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 DCLRE1AQ6PJP8 1040 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 PLEKHH3Q7Z736 793 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 ATPAF2Q8N5M1 289 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 CPSF7Q8N684 471 aaKnown RBP13.29□□□□□ -0.28
PRAME-201ENST00000398741 PPHLN1Q8NEY8 458 aaKnown RBP13.29□□□□□ -0.28
PRAME-201ENST00000398741 IPMKQ8NFU5 416 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 SPATA22Q8NHS9 363 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 NPLOC4Q8TAT6 608 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 RCN3Q96D15 328 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 SMARCD1Q96GM5 515 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 PTCH2Q9Y6C5 1203 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 FAM95CA0A1B0GW59 222 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 VAPBO95292 243 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 SBK3P0C264 359 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 DNAJB1P25685 340 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 ADSLP30566 484 aaPredicted RBP13.28□□□□□ -0.28
PRAME-201ENST00000398741 GSTT1P30711 240 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 CSRP3P50461 194 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 CHN2P52757 468 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 THOP1P52888 689 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 RAB10P61026 200 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 FOLH1Q04609 750 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 PRAMEF19Q5SWL8 479 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 TLK2Q86UE8 772 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 PGAM4Q8N0Y7 254 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 TMEM151AQ8N4L1 468 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 CCNYL1Q8N7R7 359 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 SPATA16Q9BXB7 569 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 Q9H521 79 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 CDH9Q9ULB4 789 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 SLC45A1Q9Y2W3 748 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 CAPN8A6NHC0 703 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 DLX3O60479 287 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 ANXA9O76027 345 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 SNUPNO95149 360 aaKnown RBP13.28□□□□□ -0.28
PRAME-201ENST00000398741 MYL3P08590 195 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 CD1EP15812 388 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 POLD2P49005 469 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 ADAM17P78536 824 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 MRPS22P82650 360 aaKnown RBP13.28□□□□□ -0.28
PRAME-201ENST00000398741 MPP1Q00013 466 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 ZNF33AQ06730 810 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 CTBP1Q13363 440 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 ZNF460Q14592 562 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 HERC3Q15034 1050 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 CNPY1Q3B7I2 92 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 TMEM198Q66K66 360 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 ZFP1Q6P2D0 407 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 TAC4Q86UU9 113 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 DENND6AQ8IWF6 608 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 CENPLQ8N0S6 344 aaPredicted RBP13.28□□□□□ -0.28
PRAME-201ENST00000398741 CNTD1Q8N815 330 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 USP13Q92995 863 aaPredicted RBP13.28□□□□□ -0.28
PRAME-201ENST00000398741 DCUN1D1Q96GG9 259 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 MARK4Q96L34 752 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 TSGA13Q96PP4 275 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 GCNAQ96QF7 691 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 FICDQ9BVA6 458 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 SIK2Q9H0K1 926 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 TMEM30AQ9NV96 361 aa13.28□□□□□ -0.28
PRAME-201ENST00000398741 PDCD11Q14690 1871 aaKnown RBP13.27□□□□□ -0.28
PRAME-201ENST00000398741 C17orf102A2RUQ5 167 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 CLGNO14967 610 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 MT-CYBP00156 380 aaPredicted RBP13.27□□□□□ -0.28
PRAME-201ENST00000398741 XRCC1P18887 633 aaPredicted RBP13.27□□□□□ -0.28
PRAME-201ENST00000398741 PAMP19021 973 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 CCNCP24863 283 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 GABRB3P28472 473 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 CLCNKBP51801 687 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 KPNA2P52292 529 aaKnown RBP13.27□□□□□ -0.28
PRAME-201ENST00000398741 SLC12A2P55011 1212 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 GRM2Q14416 872 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 CNGA3Q16281 694 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 ZNF423Q2M1K9 1284 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 CST9Q5W186 159 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 PM20D1Q6GTS8 502 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 CNTN4Q8IWV2 1026 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 PDCD6IPQ8WUM4 868 aaKnown RBP13.27□□□□□ -0.28
PRAME-201ENST00000398741 STON2Q8WXE9 905 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 LENG1Q96BZ8 264 aaPredicted RBP13.27□□□□□ -0.28
PRAME-201ENST00000398741 NXNL1Q96CM4 212 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms