RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 POLR1EQ9GZS1 481 aaKnown RBP14.46□□□□□ -0.09
SKA1-202ENST00000398452 TSPYL1Q9H0U9 437 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 ANKZF1Q9H8Y5 726 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 NT5MQ9NPB1 228 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 HPS4Q9NQG7 708 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 GDF3Q9NR23 364 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 LIMD1Q9UGP4 676 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 AAR2Q9Y312 384 aaKnown RBP14.46□□□□□ -0.09
SKA1-202ENST00000398452 DOCK4Q8N1I0 1966 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.45□□□□□ -0.1
SKA1-202ENST00000398452 CXorf51AA0A1B0GTR3 108 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 TIMM44O43615 452 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 CES1P23141 567 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 EIF2DP41214 584 aaKnown RBP14.45□□□□□ -0.1
SKA1-202ENST00000398452 RPL21P46778 160 aaKnown RBP14.45□□□□□ -0.1
SKA1-202ENST00000398452 NUMBP49757 651 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 PLTPP55058 493 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 RHOAP61586 193 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 ZBTB17Q13105 803 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 MORF4L2Q15014 288 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 INO80DQ53TQ3 878 aaPredicted RBP14.45□□□□□ -0.1
SKA1-202ENST00000398452 MBLAC2Q68D91 279 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 LEKR1Q6ZMV7 388 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 PRUNE1Q86TP1 453 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 APCDD1Q8J025 514 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 PAF1Q8N7H5 531 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.45□□□□□ -0.1
SKA1-202ENST00000398452 EIF1ADQ8N9N8 165 aaKnown RBP14.45□□□□□ -0.1
SKA1-202ENST00000398452 ATP11CQ8NB49 1132 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 OR52K2Q8NGK3 314 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 PNKPQ96T60 521 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 GBA3Q9H227 469 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 EPC1Q9H2F5 836 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 GLOD4Q9HC38 313 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 GTSE1Q9NYZ3 720 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 VPS51Q9UID3 782 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 CLEC4EQ9ULY5 219 aa14.45□□□□□ -0.1
SKA1-202ENST00000398452 TECTAO75443 2155 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 TBC1D3BA6NDS4 549 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 ERI2A8K979 691 aaKnown RBP14.44□□□□□ -0.1
SKA1-202ENST00000398452 ZBTB24O43167 697 aaPredicted RBP14.44□□□□□ -0.1
SKA1-202ENST00000398452 SNAP91O60641 907 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 SEC31AO94979 1220 aaKnown RBP14.44□□□□□ -0.1
SKA1-202ENST00000398452 APODP05090 189 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 APRTP07741 180 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 NFKB1P19838 968 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 CA4P22748 312 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 PSMB4P28070 264 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 TNFRSF8P28908 595 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 GJA4P35212 333 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 RECQLP46063 649 aaPredicted RBP14.44□□□□□ -0.1
SKA1-202ENST00000398452 ITGA8P53708 1063 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 GEMP55040 296 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 ECT2LQ008S8 904 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 KDSRQ06136 332 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 SLC10A7Q0GE19 358 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 EIF4HQ15056 248 aaKnown RBP14.44□□□□□ -0.1
SKA1-202ENST00000398452 BRD3Q15059 726 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 ACCSLQ4AC99 568 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 LINGO4Q6UY18 593 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 HOOK3Q86VS8 718 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 SUGP1Q8IWZ8 645 aaKnown RBP14.44□□□□□ -0.1
SKA1-202ENST00000398452 GLIS1Q8NBF1 620 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 DNASE1L2Q92874 299 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 RPP25Q9BUL9 199 aaKnown RBP14.44□□□□□ -0.1
SKA1-202ENST00000398452 FRMD8Q9BZ67 464 aaPredicted RBP14.44□□□□□ -0.1
SKA1-202ENST00000398452 FOXP3Q9BZS1 431 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 C8orf33Q9H7E9 229 aaPredicted RBP14.44□□□□□ -0.1
SKA1-202ENST00000398452 KCNK12Q9HB15 430 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 PDFQ9HBH1 243 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 ETNK1Q9HBU6 452 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 PLA2G4CQ9UP65 541 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 SHOC2Q9UQ13 582 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 SLC27A6Q9Y2P4 619 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 NEU2Q9Y3R4 380 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 DENND4AQ7Z401 1863 aa14.44□□□□□ -0.1
SKA1-202ENST00000398452 LOC730098B7Z3J9 87 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 AP3B1O00203 1094 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 TMCC1O94876 653 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 IGSF6O95976 241 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 HLA-DQB2P05538 268 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 GLDCP23378 1020 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 MAPK8P45983 427 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 SERPINH1P50454 418 aaKnown RBP14.43□□□□□ -0.1
SKA1-202ENST00000398452 NRLP54845 237 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 ARF5P84085 180 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 CDK16Q00536 496 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 RAD51Q06609 339 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 NAA30Q147X3 362 aaPredicted RBP14.43□□□□□ -0.1
SKA1-202ENST00000398452 FUT11Q495W5 492 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 FAXCQ5TGI0 409 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 RYBPQ8N488 228 aaPredicted RBP14.43□□□□□ -0.1
SKA1-202ENST00000398452 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.43□□□□□ -0.1
SKA1-202ENST00000398452 TEX26Q8N6G2 289 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 SEC14L1Q92503 715 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 PSKH2Q96QS6 385 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 FCRL5Q96RD9 977 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 FMO2Q99518 471 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 FSD1LQ9BXM9 530 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 SLC25A51Q9H1U9 297 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms