RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 C1QBPQ07021 282 aaKnown RBP16.46■□□□□ 0.23
CUX2-202ENST00000397643 CLN3Q13286 438 aa16.46■□□□□ 0.23
CUX2-202ENST00000397643 ALFQ53S48 1182 aa16.46■□□□□ 0.23
CUX2-202ENST00000397643 EFL1Q7Z2Z2 1120 aaKnown RBP16.46■□□□□ 0.23
CUX2-202ENST00000397643 DCP2Q8IU60 420 aaKnown RBP16.46■□□□□ 0.23
CUX2-202ENST00000397643 ATP11CQ8NB49 1132 aa16.46■□□□□ 0.23
CUX2-202ENST00000397643 EHBP1Q8NDI1 1231 aa16.46■□□□□ 0.23
CUX2-202ENST00000397643 FAM174AQ8TBP5 190 aa16.46■□□□□ 0.23
CUX2-202ENST00000397643 GRIN3AQ8TCU5 1115 aa16.46■□□□□ 0.23
CUX2-202ENST00000397643 ZNF606Q8WXB4 792 aa16.46■□□□□ 0.23
CUX2-202ENST00000397643 GRAMD1AQ96CP6 724 aa16.46■□□□□ 0.23
CUX2-202ENST00000397643 ANLNQ9NQW6 1124 aa16.46■□□□□ 0.23
CUX2-202ENST00000397643 HS3ST3A1Q9Y663 406 aa16.46■□□□□ 0.23
CUX2-202ENST00000397643 UBR5O95071 2799 aaPredicted RBP16.46■□□□□ 0.23
CUX2-202ENST00000397643 EME2A4GXA9 379 aaPredicted RBP16.45■□□□□ 0.22
CUX2-202ENST00000397643 SMTNL1A8MU46 457 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 ARHGAP6O43182 974 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 SLC28A2O43868 658 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 ZNF821O75541 412 aaPredicted RBP16.45■□□□□ 0.22
CUX2-202ENST00000397643 PCDH8O95206 1070 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 WISP1O95388 367 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 PRNPP04156 253 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 GLI1P08151 1106 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 KRT5P13647 590 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 RBMS1P29558 406 aaKnown RBP16.45■□□□□ 0.22
CUX2-202ENST00000397643 CDH4P55283 916 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 MYL5Q02045 173 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 KCNC4Q03721 635 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 PERM1Q5SV97 790 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 ARTNQ5T4W7 220 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 C22orf39Q6P5X5 142 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 CLEC14AQ86T13 490 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 PARGQ86W56 976 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 ZNF683Q8IZ20 524 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 WDTC1Q8N5D0 677 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 CCDC114Q96M63 670 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 CPXM1Q96SM3 734 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 C2orf49Q9BVC5 232 aaPredicted RBP16.45■□□□□ 0.22
CUX2-202ENST00000397643 SRRTQ9BXP5 876 aaKnown RBP16.45■□□□□ 0.22
CUX2-202ENST00000397643 SLC17A9Q9BYT1 436 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 MUC3BQ9H195 1237 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 EVA1BQ9NVM1 165 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 ASNSD1Q9NWL6 643 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 FARP1Q9Y4F1 1045 aaPredicted RBP16.45■□□□□ 0.22
CUX2-202ENST00000397643 CSNK1G3Q9Y6M4 447 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 WASF2Q9Y6W5 498 aa16.45■□□□□ 0.22
CUX2-202ENST00000397643 A0A0D9SEW6 157 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 CPED1A4D0V7 1026 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 BECN2A8MW95 431 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 SPINT1O43278 529 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 HSF2BPO75031 334 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 LEFTY1O75610 366 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 GRAP2O75791 330 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 GNA14O95837 355 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 GNA15P30679 374 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 CLCN6P51797 869 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 CCDC15Q0P6D6 951 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 DRAP1Q14919 205 aaPredicted RBP16.44■□□□□ 0.22
CUX2-202ENST00000397643 CCDC40Q4G0X9 1142 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 ARSIQ5FYB1 569 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 KIAA1161Q6NSJ0 714 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 CRTC1Q6UUV9 634 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 LINGO4Q6UY18 593 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 RBM44Q6ZP01 1051 aaKnown RBP16.44■□□□□ 0.22
CUX2-202ENST00000397643 DPY19L3Q6ZPD9 716 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 DCAF4L2Q8NA75 395 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 RNF34Q969K3 372 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 KLF6Q99612 283 aaPredicted RBP16.44■□□□□ 0.22
CUX2-202ENST00000397643 TNKS2Q9H2K2 1166 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 DYRK4Q9NR20 520 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 NCKIPSDQ9NZQ3 722 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 IL36AQ9UHA7 158 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 SALL4Q9UJQ4 1053 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 FADS3Q9Y5Q0 445 aa16.44■□□□□ 0.22
CUX2-202ENST00000397643 EFSO43281 561 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 AQP9O43315 295 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 THAP12O43422 761 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 MED7O43513 233 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 TCEA3O75764 348 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 PAK4O96013 591 aaPredicted RBP16.43■□□□□ 0.22
CUX2-202ENST00000397643 RHOCP08134 193 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 ADRB3P13945 408 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 RABIFP47224 123 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 NEK3P51956 506 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 RPS21P63220 83 aaKnown RBP16.43■□□□□ 0.22
CUX2-202ENST00000397643 KRT83P78385 493 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 CETN1Q12798 172 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 EIF2B5Q13144 721 aaKnown RBP16.43■□□□□ 0.22
CUX2-202ENST00000397643 NME3Q13232 169 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 MTA1Q13330 715 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 DEFB133Q30KQ1 61 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 ARL13BQ3SXY8 428 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 OLFML1Q6UWY5 402 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 FAM114A1Q8IWE2 563 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 TRIM59Q8IWR1 403 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 AOPEPQ8N6M6 819 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 EXD3Q8N9H8 876 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 CCDC97Q96F63 343 aaPredicted RBP16.43■□□□□ 0.22
CUX2-202ENST00000397643 BOCQ9BWV1 1114 aa16.43■□□□□ 0.22
CUX2-202ENST00000397643 INTS2Q9H0H0 1204 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms