RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 PPP1R13BQ96KQ4 1090 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 C2orf49Q9BVC5 232 aaPredicted RBP8.97□□□□□ -0.97
CAPN3-208ENST00000397204 INTS2Q9H0H0 1204 aaKnown RBP8.97□□□□□ -0.97
CAPN3-208ENST00000397204 ABCG4Q9H172 646 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 HS3ST2Q9Y278 367 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.97□□□□□ -0.97
CAPN3-208ENST00000397204 HS3ST3A1Q9Y663 406 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 KPNA3O00505 521 aaPredicted RBP8.96□□□□□ -0.98
CAPN3-208ENST00000397204 SCAMP1O15126 338 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 HSF2BPO75031 334 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 MT-CO1P00395 513 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 PRNPP04156 253 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 GIMD1P0DJR0 217 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 SRCP12931 536 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 PLA2G2AP14555 144 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 PRLRP16471 622 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 HNRNPA2B1P22626 353 aaKnown RBP8.96□□□□□ -0.98
CAPN3-208ENST00000397204 GNA15P30679 374 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 NOS2P35228 1153 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 PCBP4P57723 403 aaKnown RBP8.96□□□□□ -0.98
CAPN3-208ENST00000397204 HNRNPKP61978 463 aaKnown RBP eCLIP8.96□□□□□ -0.98
CAPN3-208ENST00000397204 CXADRP78310 365 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 RHDQ02161 417 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 CFHR1Q03591 330 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 SLC20A2Q08357 652 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 PDCLQ13371 301 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 POM121L1PQ3SYA9 428 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 PIP5KL1Q5T9C9 394 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 ISM2Q6H9L7 571 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 C11orf57Q6ZUT1 292 aaPredicted RBP8.96□□□□□ -0.98
CAPN3-208ENST00000397204 SETD3Q86TU7 594 aaPredicted RBP8.96□□□□□ -0.98
CAPN3-208ENST00000397204 ATP11CQ8NB49 1132 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 OR52K2Q8NGK3 314 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 COL26A1Q96A83 441 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 FEM1CQ96JP0 617 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 C1orf74Q96LT6 269 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 NOX5Q96PH1 765 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 DEPDC7Q96QD5 511 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 LGMNQ99538 433 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 DUSP23Q9BVJ7 150 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 SRRTQ9BXP5 876 aaKnown RBP8.96□□□□□ -0.98
CAPN3-208ENST00000397204 HDAC8Q9BY41 377 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 DPH1Q9BZG8 443 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 MUC3BQ9H195 1237 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 POLR1BQ9H9Y6 1135 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 DYRK4Q9NR20 520 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 UCKL1Q9NWZ5 548 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 RRN3Q9NYV6 651 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 NLGN3Q9NZ94 848 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 VANGL2Q9ULK5 521 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 CA5BQ9Y2D0 317 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 HS3ST4Q9Y661 456 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 CSNK1G3Q9Y6M4 447 aa8.96□□□□□ -0.98
CAPN3-208ENST00000397204 SYNJ2BP-COX16A0A087WUM0 186 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 DRGXA6NNA5 263 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 BNIP3LO60238 219 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 USP12O75317 370 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 PAGE1O75459 146 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 PIAS2O75928 621 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 PCDH8O95206 1070 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 FGFR1OPO95684 399 aaKnown RBP8.95□□□□□ -0.98
CAPN3-208ENST00000397204 F9P00740 461 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 CTSLP07711 333 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 ABL2P42684 1182 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 CXCR3P49682 368 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 NUMBP49757 651 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 RPS21P63220 83 aaKnown RBP8.95□□□□□ -0.98
CAPN3-208ENST00000397204 CENPCQ03188 943 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 NME3Q13232 169 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 TAF1BQ53T94 588 aaPredicted RBP8.95□□□□□ -0.98
CAPN3-208ENST00000397204 KLHL10Q6JEL2 608 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 IGF2-ASQ6U949 168 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 PCSK4Q6UW60 755 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 LRRC31Q6UY01 552 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 Q6ZSR6 202 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 ERN2Q76MJ5 926 aaKnown RBP8.95□□□□□ -0.98
CAPN3-208ENST00000397204 TMC6Q7Z403 805 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 C14orf80Q86SX3 495 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 ZSCAN30Q86W11 494 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 OR13H1Q8NG92 308 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 TPCN2Q8NHX9 752 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 SNRNP27Q8WVK2 155 aaKnown RBP8.95□□□□□ -0.98
CAPN3-208ENST00000397204 NELFBQ8WX92 580 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 KLK6Q92876 244 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 PPP1R16AQ96I34 528 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 BMFQ96LC9 184 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 APOLD1Q96LR9 279 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 CPXM1Q96SM3 734 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 CALN1Q9BXU9 219 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 SLC17A9Q9BYT1 436 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 SIK2Q9H0K1 926 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 WDCPQ9H6R7 721 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 NCKIPSDQ9NZQ3 722 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 COX16Q9P0S2 106 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 MAN1B1Q9UKM7 699 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 PAXBP1Q9Y5B6 917 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 PCDHB1Q9Y5F3 818 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 PLXNA2O75051 1894 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 HECTD1Q9ULT8 2610 aa8.95□□□□□ -0.98
CAPN3-208ENST00000397204 SPTY2D1-AS1A0A0U1RR47 76 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms