RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 SLC24A5Q71RS6 500 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.79■□□□□ 0.28
TRIM39-205ENST00000396551 NUP93Q8N1F7 819 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 CDH19Q9H159 772 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 OXSMQ9NWU1 459 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 IPO11Q9UI26 975 aaKnown RBP16.79■□□□□ 0.28
TRIM39-205ENST00000396551 TLR6Q9Y2C9 796 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 TRIM13O60858 407 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 PSMG1O95456 288 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 HADHAP40939 763 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 RANBP10Q6VN20 620 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 MON1AQ86VX9 555 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 CCDC117Q8IWD4 279 aaPredicted RBP16.79■□□□□ 0.28
TRIM39-205ENST00000396551 PPHLN1Q8NEY8 458 aaKnown RBP16.79■□□□□ 0.28
TRIM39-205ENST00000396551 MAPK15Q8TD08 544 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 KCTD4Q8WVF5 259 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 C1orf74Q96LT6 269 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 ACE2Q9BYF1 805 aaPredicted RBP16.79■□□□□ 0.28
TRIM39-205ENST00000396551 TASP1Q9H6P5 420 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 GMIPQ9P107 970 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 LRRC42Q9Y546 428 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 TMEM114B3SHH9 223 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 TM7SF2O76062 418 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 HSPA4LO95757 839 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 ZNF460Q14592 562 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 DCP1BQ8IZD4 617 aaKnown RBP16.79■□□□□ 0.28
TRIM39-205ENST00000396551 CENPLQ8N0S6 344 aaPredicted RBP16.79■□□□□ 0.28
TRIM39-205ENST00000396551 ARHGAP24Q8N264 748 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 POU5F2Q8N7G0 328 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 SHKBP1Q8TBC3 707 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 GPR152Q8TDT2 470 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 C8orf48Q96LL4 319 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 C1orf21Q9H246 121 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 FAM96AQ9H5X1 160 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 ENTPD7Q9NQZ7 604 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 TREX1Q9NSU2 369 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 ANKRD6Q9Y2G4 727 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 FAM189BP81408 668 aa16.78■□□□□ 0.28
TRIM39-205ENST00000396551 THOC5Q13769 683 aaKnown RBP16.78■□□□□ 0.28
TRIM39-205ENST00000396551 CNGA3Q16281 694 aa16.78■□□□□ 0.28
TRIM39-205ENST00000396551 POTEHQ6S545 545 aa16.78■□□□□ 0.28
TRIM39-205ENST00000396551 KDELC1Q6UW63 502 aa16.78■□□□□ 0.28
TRIM39-205ENST00000396551 TFAP2DQ7Z6R9 452 aa16.78■□□□□ 0.28
TRIM39-205ENST00000396551 CEP97Q8IW35 865 aa16.78■□□□□ 0.28
TRIM39-205ENST00000396551 SCUBE1Q8IWY4 988 aa16.78■□□□□ 0.28
TRIM39-205ENST00000396551 ULK2Q8IYT8 1036 aa16.78■□□□□ 0.28
TRIM39-205ENST00000396551 THTPAQ9BU02 230 aa16.78■□□□□ 0.28
TRIM39-205ENST00000396551 COG4Q9H9E3 785 aa16.78■□□□□ 0.28
TRIM39-205ENST00000396551 MRM3Q9HC36 420 aaKnown RBP16.78■□□□□ 0.28
TRIM39-205ENST00000396551 PRDM5Q9NQX1 630 aaPredicted RBP16.78■□□□□ 0.28
TRIM39-205ENST00000396551 KLHL2O95198 593 aa16.78■□□□□ 0.28
TRIM39-205ENST00000396551 CCR10P46092 362 aa16.78■□□□□ 0.28
TRIM39-205ENST00000396551 TAF11Q15544 211 aa16.78■□□□□ 0.28
TRIM39-205ENST00000396551 SLC9B1Q4ZJI4 515 aa16.78■□□□□ 0.28
TRIM39-205ENST00000396551 VARS2Q5ST30 1063 aaKnown RBP16.78■□□□□ 0.28
TRIM39-205ENST00000396551 EPGNQ6UW88 154 aa16.78■□□□□ 0.28
TRIM39-205ENST00000396551 ZYG11AQ6WRX3 759 aa16.78■□□□□ 0.28
TRIM39-205ENST00000396551 TLK1Q9UKI8 766 aa16.78■□□□□ 0.28
TRIM39-205ENST00000396551 CNTN5O94779 1100 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 CHRNGP07510 517 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 SLC1A2P43004 574 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 GLRBP48167 497 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 TBX4P57082 545 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 DNAL1Q4LDG9 190 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 ALFQ53S48 1182 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 MS4A13Q5J8X5 152 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 NRG4Q8WWG1 115 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 FUBP3Q96I24 572 aaKnown RBP eCLIP16.77■□□□□ 0.28
TRIM39-205ENST00000396551 FSD1LQ9BXM9 530 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 RUVBL2Q9Y230 463 aaKnown RBP16.77■□□□□ 0.28
TRIM39-205ENST00000396551 CDY1Q9Y6F8 540 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 GREB1Q4ZG55 1949 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 TARM1B6A8C7 271 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 J3KR12 359 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 DLG1Q12959 904 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 IHHQ14623 411 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 PCSK7Q16549 785 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 UMODL1-AS1Q8N2C9 162 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 ATAD1Q8NBU5 361 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 HMCESQ96FZ2 354 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 PANX3Q96QZ0 392 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 MAN1C1Q9NR34 630 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 SLC7A8Q9UHI5 535 aa16.77■□□□□ 0.28
TRIM39-205ENST00000396551 TBX10O75333 385 aa16.77■□□□□ 0.27
TRIM39-205ENST00000396551 SOAT2O75908 522 aa16.77■□□□□ 0.27
TRIM39-205ENST00000396551 TBX18O95935 607 aa16.77■□□□□ 0.27
TRIM39-205ENST00000396551 HAPLN1P10915 354 aaPredicted RBP16.77■□□□□ 0.27
TRIM39-205ENST00000396551 MYL4P12829 197 aa16.77■□□□□ 0.27
TRIM39-205ENST00000396551 WNT3AP56704 352 aa16.77■□□□□ 0.27
TRIM39-205ENST00000396551 SESN3P58005 492 aa16.77■□□□□ 0.27
TRIM39-205ENST00000396551 MXRA7P84157 204 aa16.77■□□□□ 0.27
TRIM39-205ENST00000396551 SLC25A3Q00325 362 aa16.77■□□□□ 0.27
TRIM39-205ENST00000396551 SPNS2Q8IVW8 549 aa16.77■□□□□ 0.27
TRIM39-205ENST00000396551 PHTF2Q8N3S3 785 aa16.77■□□□□ 0.27
TRIM39-205ENST00000396551 TDRD5Q8NAT2 981 aaKnown RBP16.77■□□□□ 0.27
TRIM39-205ENST00000396551 AGR3Q8TD06 166 aa16.77■□□□□ 0.27
TRIM39-205ENST00000396551 PTCD2Q8WV60 388 aaKnown RBP16.77■□□□□ 0.27
TRIM39-205ENST00000396551 FAM95CA0A1B0GW59 222 aa16.76■□□□□ 0.27
TRIM39-205ENST00000396551 MPSTP25325 297 aa16.76■□□□□ 0.27
TRIM39-205ENST00000396551 EFEMP1Q12805 493 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms