RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 PIDD1Q9HB75 910 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 ARNT2Q9HBZ2 717 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 LGALS13Q9UHV8 139 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 INTS6Q9UL03 887 aaKnown RBP12.92□□□□□ -0.34
TRIM39-204ENST00000396548 USP12O75317 370 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 MGAT1P26572 445 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 GEMP55040 296 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 MAXP61244 160 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 DSC2Q02487 901 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 LMAN2Q12907 356 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 RASA2Q15283 850 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 LONRF1Q17RB8 773 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 CTC1Q2NKJ3 1217 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 FAM78AQ5JUQ0 283 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 EMC10Q5UCC4 262 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 CELF5Q8N6W0 485 aaKnown RBP12.91□□□□□ -0.34
TRIM39-204ENST00000396548 DDI1Q8WTU0 396 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 VOPP1Q96AW1 172 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 OTUB2Q96DC9 234 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 RUFY1Q96T51 708 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 TBL1YQ9BQ87 522 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 ZNF576Q9H609 170 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 PIH1D1Q9NWS0 290 aaKnown RBP12.91□□□□□ -0.34
TRIM39-204ENST00000396548 SYBUQ9NX95 663 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 MYOFQ9NZM1 2061 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 TTC24A2A3L6 582 aaPredicted RBP12.91□□□□□ -0.34
TRIM39-204ENST00000396548 AGTP01019 485 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 MYZAPP0CAP1 466 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 PRKCHP24723 683 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 LMAN1P49257 510 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 TPGS1Q6ZTW0 290 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 MFN1Q8IWA4 741 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 DCAF4L2Q8NA75 395 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 IRF7Q92985 503 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 XPO6Q96QU8 1125 aaKnown RBP12.91□□□□□ -0.34
TRIM39-204ENST00000396548 SPHK2Q9NRA0 654 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 MOCS1Q9NZB8 636 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 TBC1D14Q9P2M4 693 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 UBA2Q9UBT2 640 aaPredicted RBP12.91□□□□□ -0.34
TRIM39-204ENST00000396548 EYSQ5T1H1 3165 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 LOC285095A0A1B0GVY8 99 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 TCRBV9S1A1TA0A576 114 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 SNAP91O60641 907 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 SPAG6O75602 509 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 FSHRP23945 695 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 CD70P32970 193 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 RGRP47804 291 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 INO80DQ53TQ3 878 aaPredicted RBP12.91□□□□□ -0.34
TRIM39-204ENST00000396548 LINC00523Q86TU6 105 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 FBF1Q8TES7 1133 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 FGF13Q92913 245 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 MUC3BQ9H195 1237 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 VPS45Q9NRW7 570 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 LHX3Q9UBR4 397 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 ZC3H7BQ9UGR2 993 aaKnown RBP12.91□□□□□ -0.34
TRIM39-204ENST00000396548 VPS51Q9UID3 782 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 FBXO10Q9UK96 956 aa12.91□□□□□ -0.34
TRIM39-204ENST00000396548 TYW5A2RUC4 315 aaKnown RBP12.9□□□□□ -0.34
TRIM39-204ENST00000396548 POU3F3P20264 500 aaPredicted RBP12.9□□□□□ -0.34
TRIM39-204ENST00000396548 NPY2RP49146 381 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 NUMBP49757 651 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 CRADDP78560 199 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 FRG1Q14331 258 aaKnown RBP12.9□□□□□ -0.34
TRIM39-204ENST00000396548 KRT71Q3SY84 523 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 NAPEPLDQ6IQ20 393 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 PLK2Q9NYY3 685 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 GDE1Q9NZC3 331 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 ANKRD36A6QL64 1941 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 RASGRF2O14827 1237 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 CD86P42081 329 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 IFFO1Q0D2I5 559 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 CDH18Q13634 790 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 EFTUD2Q15029 972 aaKnown RBP eCLIP12.9□□□□□ -0.34
TRIM39-204ENST00000396548 LRIT3Q3SXY7 679 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 CHRDL2Q6WN34 429 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 TMEM135Q86UB9 458 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 PALM2Q8IXS6 379 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 STAMBPL1Q96FJ0 436 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 ASIC4Q96FT7 647 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 TRIB3Q96RU7 358 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 SPON2Q9BUD6 331 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 POLR1EQ9GZS1 481 aaKnown RBP12.9□□□□□ -0.34
TRIM39-204ENST00000396548 TTYH1Q9H313 450 aaPredicted RBP12.9□□□□□ -0.34
TRIM39-204ENST00000396548 VPS37BQ9H9H4 285 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 SMYD2Q9NRG4 433 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 KIAA1522Q9P206 1035 aaPredicted RBP12.9□□□□□ -0.34
TRIM39-204ENST00000396548 SEPT3Q9UH03 358 aa12.9□□□□□ -0.34
TRIM39-204ENST00000396548 MUC22E2RYF6 1773 aaPredicted RBP12.9□□□□□ -0.34
TRIM39-204ENST00000396548 DOCK8Q8NF50 2099 aa12.9□□□□□ -0.35
TRIM39-204ENST00000396548 GOLGA6CA6NDK9 693 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 HMGB1P1B2RPK0 211 aaPredicted RBP12.89□□□□□ -0.35
TRIM39-204ENST00000396548 CBX4O00257 560 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 ZNF821O75541 412 aaPredicted RBP12.89□□□□□ -0.35
TRIM39-204ENST00000396548 ATXN1LP0C7T5 689 aaKnown RBP12.89□□□□□ -0.35
TRIM39-204ENST00000396548 GOLGA6DP0CG33 693 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 HLA-FP30511 346 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 WNT3AP56704 352 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 SESN2P58004 480 aaPredicted RBP12.89□□□□□ -0.35
TRIM39-204ENST00000396548 CDH17Q12864 832 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 SLC12A1Q13621 1099 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms