RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 TAF12Q16514 161 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 GALNTL6Q49A17 601 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 HECTD3Q5T447 861 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 C1orf53Q5VUE5 145 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 OVCA2Q8WZ82 227 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 DCDC2Q9UHG0 476 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 E2F8A0AVK6 867 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 ZNF840PA6NDX5 716 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 DCTN3O75935 186 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 BPGMP07738 259 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 CD86P42081 329 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 CHRNA4P43681 627 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 HARS2P49590 506 aaKnown RBP12.31□□□□□ -0.44
ITGB1-202ENST00000396033 NUMBP49757 651 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 PPM1JQ5JR12 505 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 FSTL4Q6MZW2 842 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 RFWD3Q6PCD5 774 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 POTEHQ6S545 545 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 CFAP52Q8N1V2 620 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 SLC25A41Q8N5S1 370 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 RFWD2Q8NHY2 731 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 ZNF461Q8TAF7 563 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 TOP1MTQ969P6 601 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 IMP4Q96G21 291 aaKnown RBP12.31□□□□□ -0.44
ITGB1-202ENST00000396033 ECT2Q9H8V3 914 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 SIRPGQ9P1W8 387 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 TCAF1Q9Y4C2 921 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 YIPF1Q9Y548 306 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 MAP3K13O43283 966 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 TIMM44O43615 452 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 ACSL4O60488 711 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 RFC2P35250 354 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 ACVRL1P37023 503 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 ETFBP38117 255 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 CSE1LP55060 971 aaKnown RBP12.31□□□□□ -0.44
ITGB1-202ENST00000396033 DEFB103AP81534 67 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 PLD1Q13393 1074 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 KDELC1Q6UW63 502 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 PARP9Q8IXQ6 854 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 ANKLE1Q8NAG6 615 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 ERP27Q96DN0 273 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 LRRC37BQ96QE4 947 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 MYLK2Q9H1R3 596 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 NSMCE4AQ9NXX6 385 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 TRPM5Q9NZQ8 1165 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 CHKBQ9Y259 395 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 A0A0G2JND7 137 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 BIRC5O15392 142 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 COCHO43405 550 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 HMGA1P17096 107 aaKnown RBP12.31□□□□□ -0.44
ITGB1-202ENST00000396033 ALDH1A3P47895 512 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 SLC11A2P49281 568 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 DSG1Q02413 1049 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 DSC2Q02487 901 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 IL10RBQ08334 325 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 BST1Q10588 318 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 BNIP1Q12981 228 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 SERINC3Q13530 473 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 STXBP5Q5T5C0 1151 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 RANBP10Q6VN20 620 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 NLRP9Q7RTR0 991 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 CCDC117Q8IWD4 279 aaPredicted RBP12.31□□□□□ -0.44
ITGB1-202ENST00000396033 SLC39A11Q8N1S5 342 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 ZNF398Q8TD17 642 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 ZNF483Q8TF39 744 aaPredicted RBP12.31□□□□□ -0.44
ITGB1-202ENST00000396033 EMCNQ9ULC0 261 aa12.31□□□□□ -0.44
ITGB1-202ENST00000396033 MTO1Q9Y2Z2 717 aaKnown RBP12.31□□□□□ -0.44
ITGB1-202ENST00000396033 MGRN1O60291 552 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 ABLIM3O94929 683 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 SLC6A4P31645 630 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 BTG3Q14201 252 aaPredicted RBP12.3□□□□□ -0.44
ITGB1-202ENST00000396033 SNX30Q5VWJ9 437 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 TPGS2Q68CL5 300 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 PPP1R14CQ8TAE6 165 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 PTCD2Q8WV60 388 aaKnown RBP12.3□□□□□ -0.44
ITGB1-202ENST00000396033 ISL2Q96A47 359 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 VPS39Q96JC1 886 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 HERC2P3Q9BVR0 1158 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 ABHD14A-ACY1A0A1B0GW23 586 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 IL1BP01584 269 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 URODP06132 367 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 YBEYP58557 167 aaPredicted RBP12.3□□□□□ -0.44
ITGB1-202ENST00000396033 ESRP1Q6NXG1 681 aaKnown RBP12.3□□□□□ -0.44
ITGB1-202ENST00000396033 DENND1CQ8IV53 801 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 TEX26Q8N6G2 289 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 RAB3IL1Q8TBN0 382 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 CAB39LQ9H9S4 337 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 MRM3Q9HC36 420 aaKnown RBP12.3□□□□□ -0.44
ITGB1-202ENST00000396033 VPS45Q9NRW7 570 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 PLIN3O60664 434 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 VAPBO95292 243 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 TGDSO95455 350 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 RPSAP08865 295 aaKnown RBP12.3□□□□□ -0.44
ITGB1-202ENST00000396033 GMPRP36959 345 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 MAGEA12P43365 314 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 NCALDP61601 193 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 LBRQ14739 615 aaKnown RBP12.3□□□□□ -0.44
ITGB1-202ENST00000396033 FASTKD1Q53R41 847 aaKnown RBP12.3□□□□□ -0.44
ITGB1-202ENST00000396033 ZNF689Q96CS4 500 aaPredicted RBP12.3□□□□□ -0.44
ITGB1-202ENST00000396033 SLC2A6Q9UGQ3 507 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms