RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 STK4Q13043 487 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 PKP1Q13835 747 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 PUM1Q14671 1186 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 RNPS1Q15287 305 aaKnown RBP5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 FAM153CQ494X1 144 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 SLC30A6Q6NXT4 461 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 IL20RBQ6UXL0 311 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 GPAT4Q86UL3 456 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 ARHGAP12Q8IWW6 846 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 ADGRF2Q8IZF7 708 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 C17orf53Q8N3J3 647 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 ARL14EPQ8N8R7 260 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 PSPC1Q8WXF1 523 aaKnown RBP5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 LARP4BQ92615 738 aaKnown RBP5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 PABPC5Q96DU9 382 aaKnown RBP5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 TEFMQ96QE5 360 aaKnown RBP5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 MAP7D2Q96T17 732 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 TIMP4Q99727 224 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 AP1M1Q9BXS5 423 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 ENTPD7Q9NQZ7 604 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 BABAM1Q9NWV8 329 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 CTNNAL1Q9UBT7 734 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 GIMAP2Q9UG22 337 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 FBXO40Q9UH90 709 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 TMEM5Q9Y2B1 443 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 CYP2D7A0A087X1C5 515 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 ARHGAP10A1A4S6 786 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 SLC22A23A1A5C7 686 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 TMEM247A6NEH6 219 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 MYO1GB0I1T2 1018 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 BTBD18B2RXH4 712 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 NPIPB8E9PQR5 432 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 POC1B-GALNT4F8VUJ3 575 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 WNT1P04628 370 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 WT1P19544 449 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 DPP6P42658 865 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 CYP2J2P51589 502 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 CLDN2P57739 230 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 SLC18A2Q05940 514 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 MTA1Q13330 715 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 FRG1Q14331 258 aaKnown RBP5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 GSTA3Q16772 222 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 SPECC1Q5M775 1068 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 PLEKHS1Q5SXH7 462 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 ATG9BQ674R7 924 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 RPUSD3Q6P087 351 aaKnown RBP5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 CHST9Q7L1S5 443 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 KRT74Q7RTS7 529 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 GRASPQ7Z6J2 395 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 CHSY1Q86X52 802 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 SCML4Q8N228 414 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 CCDC191Q8NCU4 936 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 ZNF398Q8TD17 642 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 HDAC7Q8WUI4 952 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 FAR1Q8WVX9 515 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 SLC9A6Q92581 669 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 PIGKQ92643 395 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 GTF3C6Q969F1 213 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 FAM149B1Q96BN6 582 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 FEM1CQ96JP0 617 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 YME1L1Q96TA2 773 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 PLEKHA4Q9H4M7 779 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 KAT14Q9H8E8 782 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 FBRSL1Q9HCM7 1045 aaKnown RBP5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 ZNF304Q9HCX3 659 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 PDE7BQ9NP56 450 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 SPATS2LQ9NUQ6 558 aaKnown RBP5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 A4GNTQ9UNA3 340 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 TNFSF13BQ9Y275 285 aa5.3□□□□□ -1.56
HMGB1P10-201ENST00000395823 FAM90A8PA6NJQ4 464 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 MSI1O43347 362 aaKnown RBP5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 ADAM20O43506 726 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 ENTPD3O75355 529 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 NEURL1O76050 574 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 PLAUP00749 431 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 TUBBP07437 444 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 CHRM5P08912 532 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 CLTBP09497 229 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 FAM90A13PP0C7W8 464 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 FAM90A24PP0C7X0 464 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 MCM3P25205 808 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 POU1F1P28069 291 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 GCH1P30793 250 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 NNMTP40261 264 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 EIF2DP41214 584 aaKnown RBP5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 PIP4K2AP48426 406 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 CACNA2D1P54289 1103 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 CDH8P55286 799 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 CSTF3Q12996 717 aaKnown RBP5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 TAF11Q15544 211 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 DPCR1Q3MIW9 517 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 RAB41Q5JT25 222 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 GKAP1Q5VSY0 366 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 FBXO42Q6P3S6 717 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 CLEC17AQ6ZS10 378 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 WDR5BQ86VZ2 330 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 UEVLDQ8IX04 471 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 DHX40Q8IX18 779 aaKnown RBP5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 OR4N2Q8NGD1 307 aa5.29□□□□□ -1.56
HMGB1P10-201ENST00000395823 NEK9Q8TD19 979 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms