RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 CRTAMO95727 393 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 CD4P01730 458 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 JUNP05412 331 aaKnown RBP18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 SPATA31D3P0C874 917 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 NPR3P17342 541 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 TFEBP19484 476 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 SAT1P21673 171 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 GLRBP48167 497 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 TPI1P60174 286 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 MS4A2Q01362 244 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 SOX4Q06945 474 aaPredicted RBP18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 SPATA31D4Q6ZUB0 917 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 PDZD4Q76G19 769 aaPredicted RBP18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 SPATA24Q86W54 205 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 TICAM1Q8IUC6 712 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 LSMEM2Q8N112 164 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 CD99L2Q8TCZ2 262 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 USP13Q92995 863 aaPredicted RBP18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 LRRC4Q9HBW1 653 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 WDR6Q9NNW5 1121 aaKnown RBP18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 RAD54BQ9Y620 910 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 MAGEB16A2A368 324 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 NRP1O14786 923 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 SLC22A2O15244 555 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 CABYRO75952 493 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 TAF6P49848 677 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 HK2P52789 917 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 RABGGTBP53611 331 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 NAGLUP54802 743 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 PRKAA1Q13131 559 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 CNGA3Q16281 694 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 RARS2Q5T160 578 aaKnown RBP18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 ISLR2Q6UXK2 745 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 SETD3Q86TU7 594 aaPredicted RBP18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 ZC3HC1Q86WB0 502 aaKnown RBP18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 PGAM4Q8N0Y7 254 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 LILRA2Q8N149 483 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 MARK4Q96L34 752 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 LRGUKQ96M69 825 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 PRICKLE1Q96MT3 831 aaPredicted RBP18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 CLIC5Q9NZA1 410 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 TLK1Q9UKI8 766 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 RAB26Q9ULW5 256 aa18.62■□□□□ 0.57
PCDHA1-202ENST00000394633 CCDC78A2IDD5 438 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 CFLARO15519 480 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 GPR32O75388 356 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 ENO3P13929 434 aaPredicted RBP18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 AKR1A1P14550 325 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 AVPR1AP37288 418 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 ZFP1Q6P2D0 407 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 CLEC20AQ6ZU45 233 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 SIX6OS1Q8N1H7 587 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 RNF148Q8N7C7 305 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 BHLHE22Q8NFJ8 381 aaPredicted RBP18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 STYXQ8WUJ0 223 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 KCTD4Q8WVF5 259 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 KCTD13Q8WZ19 329 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 SCYL1Q96KG9 808 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 OSMRQ99650 979 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 COPS7BQ9H9Q2 264 aaPredicted RBP18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 UBP1Q9NZI7 540 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 NDUFA13Q9P0J0 144 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 RUVBL2Q9Y230 463 aaKnown RBP18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 TARM1B6A8C7 271 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 STX16-NPEPL1H3BU86 382 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 TFAP2AP05549 437 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 SLC35E2BP0CK96 405 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 HADHAP40939 763 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 PRKAA2P54646 552 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 HERC3Q15034 1050 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 TMEM126BQ8IUX1 230 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 NTAN1Q96AB6 310 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 HDAC11Q96DB2 347 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 SLC9A7Q96T83 725 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 RHOJQ9H4E5 214 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 WDR41Q9HAD4 459 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 TRHDEQ9UKU6 1024 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 CDYLQ9Y232 598 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 AP4B1Q9Y6B7 739 aa18.61■□□□□ 0.57
PCDHA1-202ENST00000394633 NRCAMQ92823 1304 aa18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 NCAM2O15394 837 aa18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 HUS1O60921 280 aa18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 ZNF189O75820 626 aaPredicted RBP18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 PGK1P00558 417 aa18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 CYP2C9P11712 490 aa18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 WARSP23381 471 aaKnown RBP18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 ADSLP30566 484 aaPredicted RBP18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 PNPLA4P41247 253 aa18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 TKTL1P51854 596 aa18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 CACNB2Q08289 660 aaPredicted RBP18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 SCAPQ12770 1279 aa18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 USP10Q14694 798 aaKnown RBP18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 PPP2R5DQ14738 602 aa18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 FSCN1Q16658 493 aaKnown RBP18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 NXNQ6DKJ4 435 aa18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 CENPLQ8N0S6 344 aaPredicted RBP18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 FSTL5Q8N475 847 aaPredicted RBP18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 STON2Q8WXE9 905 aa18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 NMD3Q96D46 503 aaKnown RBP18.6■□□□□ 0.57
PCDHA1-202ENST00000394633 DNAI2Q9GZS0 605 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms