RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 GTF2IRD2Q86UP8 949 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 CD101Q93033 1021 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 RPL26L1Q9UNX3 145 aaKnown RBP13.56□□□□□ -0.24
USP49-203ENST00000394253 POFUT2Q9Y2G5 429 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 CLDN25C9JDP6 229 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 H3BNH8 94 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 IPO13O94829 963 aaKnown RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 SWSAP1Q6NVH7 229 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 HAGHLQ6PII5 290 aaPredicted RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 POLD4Q9HCU8 107 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 PIH1D3Q9NQM4 214 aaKnown RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 EDARQ9UNE0 448 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 OAS3Q9Y6K5 1087 aaKnown RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 RFX7Q2KHR2 1363 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 CSH1P0DML2 217 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 CSH2P0DML3 217 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 FCER1AP12319 257 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 LSM3P62310 102 aaKnown RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 PABPC1LQ4VXU2 614 aaKnown RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 CIR1Q86X95 450 aaPredicted RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 MSL3Q8N5Y2 521 aaKnown RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 TRNT1Q96Q11 434 aaKnown RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 VPS4AQ9UN37 437 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 A1BGP04217 495 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 PVALBP20472 110 aaPredicted RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 RENBPP51606 427 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 MGAT5Q09328 741 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 GPAT2Q6NUI2 795 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 COG5Q9UP83 839 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 SSX4O60224 188 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 GOLGA7BQ2TAP0 167 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 METTL6Q8TCB7 284 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 HPDLQ96IR7 371 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 LMAN2LQ9H0V9 348 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 OSGEPL1Q9H4B0 414 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 EIF3KQ9UBQ5 218 aaKnown RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 HSBP1L1C9JCN9 74 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 CCNT2O60583 730 aaKnown RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 DOK7Q18PE1 504 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 FAXCQ5TGI0 409 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 IER5Q5VY09 327 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 TRIM40Q6P9F5 258 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 RNF149Q8NC42 400 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 PNPT1Q8TCS8 783 aaKnown RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 ACE2Q9BYF1 805 aaPredicted RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 CAMTA2O94983 1202 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 IFI30P13284 250 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 SLC6A2P23975 617 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 POLD2P49005 469 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 PHC1P78364 1004 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 TTMPQ5BVD1 217 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 IL27RAQ6UWB1 636 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 DNAJC14Q6Y2X3 702 aaPredicted RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 DGLUCYQ7Z3D6 616 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 NOA1Q8NC60 698 aaKnown RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 EZH1Q92800 747 aaPredicted RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 PHF21BQ96EK2 531 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 PANX3Q96QZ0 392 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 RBM4BQ9BQ04 359 aaKnown RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 RBM4Q9BWF3 364 aaKnown RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 MUC13Q9H3R2 512 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 SNX6Q9UNH7 406 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 HMGCRP04035 888 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 THAP5Q7Z6K1 395 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 DCP1BQ8IZD4 617 aaKnown RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 NAT14Q8WUY8 206 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 TAS2R7Q9NYW3 318 aa13.55□□□□□ -0.24
USP49-203ENST00000394253 SAMHD1Q9Y3Z3 626 aaKnown RBP13.55□□□□□ -0.24
USP49-203ENST00000394253 ABCA11PQ4W5N1 156 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 MAGEE1Q9HCI5 957 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 ARHGEF4Q9NR80 690 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 PEX16Q9Y5Y5 336 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 CD151P48509 253 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 VPS26BQ4G0F5 336 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 DNAAF5Q86Y56 855 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 C16orf58Q96GQ5 468 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 TBCCD1Q9NVR7 557 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 AGAP1Q9UPQ3 857 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 NCKAP1Q9Y2A7 1128 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 DHRS12A0PJE2 317 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 OR1I1O60431 355 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 IRF1P10914 325 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 COX7A2P14406 83 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 STXBP1P61764 594 aaKnown RBP13.54□□□□□ -0.24
USP49-203ENST00000394253 N4BP2L1Q5TBK1 243 aaPredicted RBP13.54□□□□□ -0.24
USP49-203ENST00000394253 NDNQ99608 321 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 KIAA1257Q9ULG3 409 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 KIF28PB7ZC32 967 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 EGFRP00533 1210 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 PHKG2P15735 406 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 KCNJ1P48048 391 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 CSHL1Q14406 222 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 PCID2Q5JVF3 399 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 AMIGO1Q86WK6 493 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 DNAJB14Q8TBM8 379 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 ADAM32Q8TC27 787 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 MIPEPQ99797 713 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 NIF3L1Q9GZT8 377 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 BBOX1O75936 387 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 CYP17A1P05093 508 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms