RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 PLA2G4CQ9UP65 541 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 SLC8A2Q9UPR5 921 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.48□□□□□ -0.25
USP44-202ENST00000393091 FAM170BA6NMN3 283 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 DFFAO00273 331 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 PDE2AO00408 941 aaPredicted RBP13.48□□□□□ -0.25
USP44-202ENST00000393091 MMP2P08253 660 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 COILP38432 576 aaPredicted RBP13.48□□□□□ -0.25
USP44-202ENST00000393091 MMP13P45452 471 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 DGKEP52429 567 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 MARC1Q5VT66 337 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 KAZNQ674X7 775 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 BBS5Q8N3I7 341 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 OR2AP1Q8NGE2 309 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 FERMT1Q9BQL6 677 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 GORASP1Q9BQQ3 440 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 SLC25A51Q9H1U9 297 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 PRSS16Q9NQE7 514 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 EIF2B3Q9NR50 452 aaKnown RBP13.48□□□□□ -0.25
USP44-202ENST00000393091 DNPEPQ9ULA0 475 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 PPM1HQ9ULR3 514 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 TRAFD1O14545 582 aaPredicted RBP13.47□□□□□ -0.25
USP44-202ENST00000393091 ZNF185O15231 689 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 SLC7A4O43246 635 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 FZD6O60353 706 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 RBP3P10745 1247 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 NNMTP40261 264 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 PTGIRP43119 386 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 SNRPD1P62314 119 aaKnown RBP13.47□□□□□ -0.25
USP44-202ENST00000393091 ZBTB17Q13105 803 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 DHX34Q14147 1143 aaKnown RBP13.47□□□□□ -0.25
USP44-202ENST00000393091 GAS6Q14393 721 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 CNTD1Q8N815 330 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 OR2T3Q8NH03 318 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 TTC8Q8TAM2 541 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 GRK7Q8WTQ7 553 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 MS4A14Q96JA4 679 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 CCDC114Q96M63 670 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 GDAP1L1Q96MZ0 367 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 SPATA13Q96N96 652 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 LGMNQ99538 433 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 GBA3Q9H227 469 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 FBXO4Q9UKT5 387 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 GOLGA6L10A0A0M3HER8 536 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 PRR33A8MZF0 331 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 CBX4O00257 560 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 EPOP01588 193 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 PSMA3P25788 255 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 CXCR5P32302 372 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 ST8SIA6P61647 398 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 ELAVL3Q14576 367 aaKnown RBP13.47□□□□□ -0.25
USP44-202ENST00000393091 C2orf27AQ580R0 203 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 MMGT1Q8N4V1 131 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 CCHCR1Q8TD31 782 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 NSMCE1Q8WV22 266 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 HDAC8Q9BY41 377 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 VPS45Q9NRW7 570 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 HEY1Q9Y5J3 304 aa13.47□□□□□ -0.25
USP44-202ENST00000393091 RNF40O75150 1001 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 SUN1O94901 812 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 POP4O95707 220 aaKnown RBP13.46□□□□□ -0.25
USP44-202ENST00000393091 MT-CO1P00395 513 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 CD68P34810 354 aaPredicted RBP13.46□□□□□ -0.25
USP44-202ENST00000393091 SLC10A7Q0GE19 358 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 DLG2Q15700 870 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 ZFYVE27Q5T4F4 411 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 KCTD11Q693B1 232 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 TTC27Q6P3X3 843 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 USP30Q70CQ3 517 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 SRLQ86TD4 932 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 SEC14L1Q92503 715 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 COL25A1Q9BXS0 654 aaPredicted RBP13.46□□□□□ -0.25
USP44-202ENST00000393091 PCDH9Q9HC56 1237 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 C11orf16Q9NQ32 467 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 TPX2Q9ULW0 747 aaKnown RBP13.46□□□□□ -0.25
USP44-202ENST00000393091 ERI2A8K979 691 aaKnown RBP13.46□□□□□ -0.25
USP44-202ENST00000393091 PSMD3O43242 534 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 SMAD6O43541 496 aaKnown RBP13.46□□□□□ -0.25
USP44-202ENST00000393091 ADH1BP00325 375 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 CCR3P51677 355 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 SKOR1P84550 965 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 MYLK3Q32MK0 819 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 HEATR6Q6AI08 1181 aaKnown RBP13.46□□□□□ -0.25
USP44-202ENST00000393091 POLR1EQ9GZS1 481 aaKnown RBP13.46□□□□□ -0.25
USP44-202ENST00000393091 KCNH6Q9H252 994 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 KDM4CQ9H3R0 1056 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 USP36Q9P275 1121 aaKnown RBP13.46□□□□□ -0.25
USP44-202ENST00000393091 SAE1Q9UBE0 346 aaPredicted RBP13.46□□□□□ -0.25
USP44-202ENST00000393091 ARIH1Q9Y4X5 557 aaPredicted RBP13.46□□□□□ -0.25
USP44-202ENST00000393091 WASF2Q9Y6W5 498 aa13.46□□□□□ -0.25
USP44-202ENST00000393091 TECTAO75443 2155 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 TTC34A8MYJ7 566 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 K7ESF4 209 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 MUSKO15146 869 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 IGSF6O95976 241 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 RBL1P28749 1068 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 PAFAH1B1P43034 410 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 TUBB4BP68371 445 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 PTK6Q13882 451 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 CRY1Q16526 586 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms