RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 TRDNQ13061 729 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 TRIM28Q13263 835 aaKnown RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 SQLEQ14534 574 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 IL13RA2Q14627 380 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 PABPC1LQ4VXU2 614 aaKnown RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 FSCBQ5H9T9 825 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 SH2D4BQ5SQS7 431 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 TMEM211Q6ICI0 200 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 SULT1C3Q6IMI6 304 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 MOB3CQ70IA8 216 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 LDHDQ86WU2 507 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 OR7D4Q8NG98 312 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 ELP4Q96EB1 424 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 LENG8Q96PV6 779 aaPredicted RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 TUBA1CQ9BQE3 449 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 MRI1Q9BV20 369 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 NCOR1P1Q9H4R4 102 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 MED4Q9NPJ6 270 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 G6PC2Q9NQR9 355 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 FAM118AQ9NWS6 357 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 PRR13Q9NZ81 148 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 GPRC5DQ9NZD1 345 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 SH3BP4Q9P0V3 963 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 SERTAD3Q9UJW9 196 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 OSGIN2Q9Y236 505 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 SOS2Q07890 1332 aaPredicted RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 AGAP14A8MT82 685 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 TULP2O00295 520 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 ST8SIA3O43173 380 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 LYL1P12980 280 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 PAX7P23759 505 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 CYP2F1P24903 491 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 GNL1P36915 607 aaPredicted RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 CASRP41180 1078 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 SNU13P55769 128 aaKnown RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 TAP1Q03518 808 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 SEMA3BQ13214 749 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 PCID2Q5JVF3 399 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 TMEM81Q6P7N7 255 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 RNF111Q6ZNA4 994 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 RNF144BQ7Z419 303 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 TADA2BQ86TJ2 420 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 RFX6Q8HWS3 928 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 ZCCHC9Q8N567 271 aaKnown RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 VGLL2Q8N8G2 317 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 WDR19Q8NEZ3 1342 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 SNX33Q8WV41 574 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 PPP1R10Q96QC0 940 aaKnown RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 GSDMCQ9BYG8 508 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 EPHX3Q9H6B9 360 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 KLHL1Q9NR64 748 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 SLAMF8Q9P0V8 285 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 MRPL11Q9Y3B7 192 aaKnown RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 TTC21BQ7Z4L5 1316 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 DNM1LO00429 736 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 SMAD9O15198 467 aaKnown RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 CD3EAPO15446 510 aaKnown RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 GBAP04062 536 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 AMY1AP04745 511 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 POLR2MP0CAP2 368 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 CHRNA4P43681 627 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 PREPP48147 710 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 CCNA1P78396 465 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 RING1Q06587 406 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 LASP1Q14847 261 aaKnown RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 FOXR2Q6PJQ5 311 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 KIAA1324Q6UXG2 1013 aaKnown RBP3.63□□□□□ -1.83
XRN1-202ENST00000392981 SPATA19Q7Z5L4 167 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 CCDC65Q8IXS2 484 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 KDM8Q8N371 416 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 ZBTB9Q96C00 473 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 CITED1Q99966 193 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 SEMA3CQ99985 751 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 CEP41Q9BYV8 373 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 HAUS4Q9H6D7 363 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 TAS2R14Q9NYV8 317 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 AGAP1Q9UPQ3 857 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 MED16Q9Y2X0 877 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 PCDHGA5Q9Y5G8 931 aa3.63□□□□□ -1.83
XRN1-202ENST00000392981 TTC41PQ6P2S7 1318 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 CFAP73A6NFT4 308 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 A8MXE2 369 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ZC3H11AO75152 810 aaKnown RBP eCLIP3.62□□□□□ -1.837e-6■■■■■ 33.7
XRN1-202ENST00000392981 SERPINI2O75830 405 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 TRIM16O95361 564 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 NPPAP01160 153 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ENO2P09104 434 aaPredicted RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 FCGR1AP12314 374 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 PKMP14618 531 aaKnown RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 HLA-FP30511 346 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ZNF827Q17R98 1081 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 KLHL26Q53HC5 615 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 HS1BP3Q53T59 392 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 COLEC12Q5KU26 742 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ANKRD34AQ69YU3 496 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ERICH5Q6P6B1 374 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 PTCHD4Q6ZW05 846 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ZNF321PQ8N8H1 164 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 GMCL1P1Q8NEA9 526 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 PHOSPHO1Q8TCT1 267 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms