RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 EPB41L4BQ9H329 900 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 EFCAB10A6NFE3 127 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 KCNH1O95259 989 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 HPGDP15428 266 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 TYMPP19971 482 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 TOP3AQ13472 1001 aaPredicted RBP13.28□□□□□ -0.28
LCA5-202ENST00000392959 GRIK5Q16478 980 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 CRY1Q16526 586 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 ZIK1Q3SY52 487 aaPredicted RBP13.28□□□□□ -0.28
LCA5-202ENST00000392959 BROXQ5VW32 411 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 KHDRBS2Q5VWX1 349 aaKnown RBP13.28□□□□□ -0.28
LCA5-202ENST00000392959 C4orf32Q8N8J7 132 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 FAM13CQ8NE31 585 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 GAD1Q99259 594 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 MRPL57Q9BQC6 102 aaKnown RBP13.28□□□□□ -0.28
LCA5-202ENST00000392959 SLC4A5Q9BY07 1137 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 LRRC4CQ9HCJ2 640 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 RPS6KB2Q9UBS0 482 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 PRPF19Q9UMS4 504 aaKnown RBP13.28□□□□□ -0.28
LCA5-202ENST00000392959 ADGRB2O60241 1585 aa13.27□□□□□ -0.28
LCA5-202ENST00000392959 BCL9O00512 1426 aa13.27□□□□□ -0.28
LCA5-202ENST00000392959 PRR5-ARHGAP8B1AHC4 643 aa13.27□□□□□ -0.28
LCA5-202ENST00000392959 ZBTB14O43829 449 aa13.27□□□□□ -0.28
LCA5-202ENST00000392959 ARHGAP8P85298 464 aa13.27□□□□□ -0.28
LCA5-202ENST00000392959 ZC3H12AQ5D1E8 599 aaKnown RBP13.27□□□□□ -0.28
LCA5-202ENST00000392959 ARMC12Q5T9G4 340 aa13.27□□□□□ -0.28
LCA5-202ENST00000392959 FAM171A1Q5VUB5 890 aa13.27□□□□□ -0.28
LCA5-202ENST00000392959 BPIFB6Q8NFQ5 453 aa13.27□□□□□ -0.28
LCA5-202ENST00000392959 SELENOMQ8WWX9 145 aa13.27□□□□□ -0.28
LCA5-202ENST00000392959 TNFRSF25Q93038 417 aa13.27□□□□□ -0.28
LCA5-202ENST00000392959 TRIM63Q969Q1 353 aa13.27□□□□□ -0.28
LCA5-202ENST00000392959 CDT1Q9H211 546 aa13.27□□□□□ -0.28
LCA5-202ENST00000392959 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.27□□□□□ -0.28
LCA5-202ENST00000392959 SLC17A7Q9P2U7 560 aa13.27□□□□□ -0.28
LCA5-202ENST00000392959 XPR1Q9UBH6 696 aa13.27□□□□□ -0.28
LCA5-202ENST00000392959 SNAP91O60641 907 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 WEE1P30291 646 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 ADSSP30520 456 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 IL12RB1P42701 662 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 RAB10P61026 200 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 BCL2L1Q07817 233 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 SREBF2Q12772 1141 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 RIPK1Q13546 671 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 SKIV2LQ15477 1246 aaKnown RBP13.27□□□□□ -0.29
LCA5-202ENST00000392959 ARSHQ5FYA8 562 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 HYIQ5T013 277 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 STXBP5Q5T5C0 1151 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 ZNF57Q68EA5 555 aaPredicted RBP13.27□□□□□ -0.29
LCA5-202ENST00000392959 ZCCHC8Q6NZY4 707 aaKnown RBP13.27□□□□□ -0.29
LCA5-202ENST00000392959 SPESP1Q6UW49 350 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 FAM45AQ8TCE6 357 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 LGMNQ99538 433 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 MECRQ9BV79 373 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 MARCH2Q9P0N8 246 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 FBXO5Q9UKT4 447 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 LOC100506127A0A0U1RQW1 187 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 TRIM43BA6NCK2 446 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 BUD23O43709 281 aaKnown RBP13.27□□□□□ -0.29
LCA5-202ENST00000392959 CABYRO75952 493 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 RTN3O95197 1032 aaPredicted RBP13.27□□□□□ -0.29
LCA5-202ENST00000392959 ITGB5P18084 799 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 MAPKAPK3Q16644 382 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 RGS21Q2M5E4 152 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 ATAD3BQ5T9A4 648 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 LIPMQ5VYY2 423 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 WSCD1Q658N2 575 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 NEK10Q6ZWH5 1172 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 MTSS1LQ765P7 747 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 CLNKQ7Z7G1 428 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 AMIGO2Q86SJ2 522 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 KIAA0319LQ8IZA0 1049 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 ANKRD52Q8NB46 1076 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 WDR48Q8TAF3 677 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 ZCCHC2Q9C0B9 1178 aaKnown RBP13.27□□□□□ -0.29
LCA5-202ENST00000392959 DIABLOQ9NR28 239 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 ZSCAN32Q9NX65 697 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 FAM198AQ9UFP1 575 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 BTBD3Q9Y2F9 522 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 AP4B1Q9Y6B7 739 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 ATXN2Q99700 1313 aaKnown RBP13.27□□□□□ -0.29
LCA5-202ENST00000392959 TK2O00142 265 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 RNASEH1O60930 286 aaKnown RBP13.27□□□□□ -0.29
LCA5-202ENST00000392959 WFS1O76024 890 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 LGALS2P05162 132 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 HGFP14210 728 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 CCNB1P14635 433 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 ERCC2P18074 760 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 DGKAP23743 735 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 SHROOM1Q2M3G4 852 aaPredicted RBP13.27□□□□□ -0.29
LCA5-202ENST00000392959 AMER2Q8N7J2 671 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 RDH11Q8TC12 318 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 SNX15Q9NRS6 342 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 CPA4Q9UI42 421 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 AK5Q9Y6K8 562 aa13.27□□□□□ -0.29
LCA5-202ENST00000392959 ROBO3Q96MS0 1386 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 TMEM191CA6NGB0 347 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 AVILO75366 819 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 SH3BGRLO75368 114 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 LYPLA1O75608 230 aaPredicted RBP13.26□□□□□ -0.29
LCA5-202ENST00000392959 GOT1P17174 413 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms