RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 C4orf22Q6V702 233 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 CYP2R1Q6VVX0 501 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 CLEC20AQ6ZU45 233 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 TP53INP2Q8IXH6 220 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 SNX31Q8N9S9 440 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
BRF1-204ENST00000392557 DTNBP1Q96EV8 351 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 ADAM2Q99965 735 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 GALNT8Q9NY28 637 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 VANGL2Q9ULK5 521 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 RUVBL2Q9Y230 463 aaKnown RBP11.01□□□□□ -0.65
BRF1-204ENST00000392557 NRP1O14786 923 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 GPC4O75487 556 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 C2P06681 752 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 ARRB2P32121 409 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 RPL5P46777 297 aaKnown RBP11.01□□□□□ -0.65
BRF1-204ENST00000392557 SLC12A2P55011 1212 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 CACNB2Q08289 660 aaPredicted RBP11.01□□□□□ -0.65
BRF1-204ENST00000392557 CERCAMQ5T4B2 595 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 NAPRTQ6XQN6 538 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 ACMSDQ8TDX5 336 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 DGCR14Q96DF8 476 aaKnown RBP11.01□□□□□ -0.65
BRF1-204ENST00000392557 PCED1BQ96HM7 432 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 CCT7Q99832 543 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 SUDS3Q9H7L9 328 aaPredicted RBP11.01□□□□□ -0.65
BRF1-204ENST00000392557 CRTAC1Q9NQ79 661 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 DNAJC28Q9NX36 388 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 MOCS1Q9NZB8 636 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 PSMD13Q9UNM6 376 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 FAF1Q9UNN5 650 aaPredicted RBP11.01□□□□□ -0.65
BRF1-204ENST00000392557 SNX13Q9Y5W8 968 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 F8W810 466 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 EEF2KO00418 725 aaKnown RBP11.01□□□□□ -0.65
BRF1-204ENST00000392557 SEC24DO94855 1032 aaPredicted RBP11.01□□□□□ -0.65
BRF1-204ENST00000392557 ATP5BP06576 529 aaKnown RBP11.01□□□□□ -0.65
BRF1-204ENST00000392557 MATKP42679 507 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 GRIA4P48058 902 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 NR2C2P49116 596 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 SH3BGRP55822 239 aaPredicted RBP11.01□□□□□ -0.65
BRF1-204ENST00000392557 MPP3Q13368 585 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 CCDC153Q494R4 210 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 NADK2Q4G0N4 442 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 AMIGO2Q86SJ2 522 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 ZDHHC17Q8IUH5 632 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 URGCPQ8TCY9 931 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 PPP1R10Q96QC0 940 aaKnown RBP11.01□□□□□ -0.65
BRF1-204ENST00000392557 GATA5Q9BWX5 397 aaPredicted RBP11.01□□□□□ -0.65
BRF1-204ENST00000392557 WDR41Q9HAD4 459 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 CYP4F12Q9HCS2 524 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 PREBQ9HCU5 417 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 SLC38A7Q9NVC3 462 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 CDYLQ9Y232 598 aa11.01□□□□□ -0.65
BRF1-204ENST00000392557 SF3B1O75533 1304 aaKnown RBP eCLIP11.01□□□□□ -0.653e-6■■■■■ 56.8
BRF1-204ENST00000392557 ZSWIM8A7E2V4 1837 aa11□□□□□ -0.65
BRF1-204ENST00000392557 SMIM31A0A1B0GVY4 71 aa11□□□□□ -0.65
BRF1-204ENST00000392557 YJEFN3A6XGL0 299 aa11□□□□□ -0.65
BRF1-204ENST00000392557 ENDOD1O94919 500 aa11□□□□□ -0.65
BRF1-204ENST00000392557 C1QAP02745 245 aa11□□□□□ -0.65
BRF1-204ENST00000392557 BDNFP23560 247 aa11□□□□□ -0.65
BRF1-204ENST00000392557 AGMOQ6ZNB7 445 aa11□□□□□ -0.65
BRF1-204ENST00000392557 GPRIN1Q7Z2K8 1008 aa11□□□□□ -0.65
BRF1-204ENST00000392557 TOP6BLQ8N6T0 577 aa11□□□□□ -0.65
BRF1-204ENST00000392557 PNPLA1Q8N8W4 532 aa11□□□□□ -0.65
BRF1-204ENST00000392557 HSFY1Q96LI6 401 aa11□□□□□ -0.65
BRF1-204ENST00000392557 QKIQ96PU8 341 aaKnown RBP eCLIP11□□□□□ -0.65
BRF1-204ENST00000392557 LRRC40Q9H9A6 602 aa11□□□□□ -0.65
BRF1-204ENST00000392557 PCDHGB4Q9UN71 923 aa11□□□□□ -0.65
BRF1-204ENST00000392557 PCDHGB5Q9Y5G0 923 aa11□□□□□ -0.65
BRF1-204ENST00000392557 CRTAMO95727 393 aa11□□□□□ -0.65
BRF1-204ENST00000392557 FAM58BPP0C7Q3 252 aa11□□□□□ -0.65
BRF1-204ENST00000392557 CYBAP13498 195 aa11□□□□□ -0.65
BRF1-204ENST00000392557 TUBB3Q13509 450 aa11□□□□□ -0.65
BRF1-204ENST00000392557 SEMA5AQ13591 1074 aa11□□□□□ -0.65
BRF1-204ENST00000392557 PTK2BQ14289 1009 aa11□□□□□ -0.65
BRF1-204ENST00000392557 LSM12Q3MHD2 195 aaKnown RBP11□□□□□ -0.65
BRF1-204ENST00000392557 TIGD5Q53EQ6 642 aa11□□□□□ -0.65
BRF1-204ENST00000392557 NCBP2-AS2Q69YL0 99 aa11□□□□□ -0.65
BRF1-204ENST00000392557 LRRC8BQ6P9F7 803 aa11□□□□□ -0.65
BRF1-204ENST00000392557 B3GNT6Q6ZMB0 384 aa11□□□□□ -0.65
BRF1-204ENST00000392557 CPNE1Q99829 537 aa11□□□□□ -0.65
BRF1-204ENST00000392557 ACE2Q9BYF1 805 aaPredicted RBP11□□□□□ -0.65
BRF1-204ENST00000392557 STN1Q9H668 368 aaKnown RBP11□□□□□ -0.65
BRF1-204ENST00000392557 IL1RL2Q9HB29 575 aa11□□□□□ -0.65
BRF1-204ENST00000392557 CHRAC1Q9NRG0 131 aa11□□□□□ -0.65
BRF1-204ENST00000392557 DDIT4Q9NX09 232 aa11□□□□□ -0.65
BRF1-204ENST00000392557 NUDT5Q9UKK9 219 aa11□□□□□ -0.65
BRF1-204ENST00000392557 STAP1Q9ULZ2 295 aa11□□□□□ -0.65
BRF1-204ENST00000392557 SNX10Q9Y5X0 201 aa11□□□□□ -0.65
BRF1-204ENST00000392557 ARHGAP10A1A4S6 786 aa11□□□□□ -0.65
BRF1-204ENST00000392557 RGSL1A5PLK6 1076 aa11□□□□□ -0.65
BRF1-204ENST00000392557 DPYSL4O14531 572 aa11□□□□□ -0.65
BRF1-204ENST00000392557 MDM4O15151 490 aa11□□□□□ -0.65
BRF1-204ENST00000392557 GPR182O15218 404 aa11□□□□□ -0.65
BRF1-204ENST00000392557 MGEA5O60502 916 aa11□□□□□ -0.65
BRF1-204ENST00000392557 TPST1O60507 370 aa11□□□□□ -0.65
BRF1-204ENST00000392557 AOC2O75106 756 aa11□□□□□ -0.65
BRF1-204ENST00000392557 PABPC4LP0CB38 370 aaKnown RBP11□□□□□ -0.65
BRF1-204ENST00000392557 MYL4P12829 197 aa11□□□□□ -0.65
BRF1-204ENST00000392557 ME2P23368 584 aa11□□□□□ -0.65
BRF1-204ENST00000392557 MTTPP55157 894 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms