RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 MAN1C1Q9NR34 630 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 SAE1Q9UBE0 346 aaPredicted RBP19.92■□□□□ 0.78
SHANK1-203ENST00000391813 WDR37Q9Y2I8 494 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 AMPD1P23109 780 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 ETFBP38117 255 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 COX10Q12887 443 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 GRIK4Q16099 956 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 TYW3Q6IPR3 259 aaKnown RBP19.92■□□□□ 0.78
SHANK1-203ENST00000391813 CES3Q6UWW8 571 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 ELOVL6Q9H5J4 265 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 REEP1Q9H902 201 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 PNPLA8Q9NP80 782 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 PRG3Q9Y2Y8 225 aaPredicted RBP19.92■□□□□ 0.78
SHANK1-203ENST00000391813 ZC3H4Q9UPT8 1303 aaKnown RBP19.92■□□□□ 0.78
SHANK1-203ENST00000391813 AVILO75366 819 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 TCEA3O75764 348 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 ACO1P21399 889 aaKnown RBP19.92■□□□□ 0.78
SHANK1-203ENST00000391813 TUBA4AP68366 448 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 ANO7Q6IWH7 933 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 EPB41L1Q9H4G0 881 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 ENTPD7Q9NQZ7 604 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 CYP3A7-CYP3A51PA0A087WV96 503 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 EML1O00423 815 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 CCNB1P14635 433 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 CYP3A7P24462 503 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 HPCAP84074 193 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 HYIQ5T013 277 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 TMEM132CQ8N3T6 1108 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 EFCAB3Q8N7B9 438 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 FAM45AQ8TCE6 357 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 C17orf50Q8WW18 174 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 RBM22Q9NW64 420 aaKnown RBP eCLIP19.92■□□□□ 0.78
SHANK1-203ENST00000391813 ADPRHL2Q9NX46 363 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 TAS2R13Q9NYV9 303 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 LRRC42Q9Y546 428 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 RPTORQ8N122 1335 aa19.92■□□□□ 0.78
SHANK1-203ENST00000391813 LOC100506127A0A0U1RQW1 187 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 PSEN2P49810 448 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 ACTR3P61158 418 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 MFSD10Q14728 455 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 PGS1Q32NB8 556 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 ATAD3BQ5T9A4 648 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 METTL6Q8TCB7 284 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 SPPL2AQ8TCT8 520 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 SPOCK2Q92563 424 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 ZNF512Q96ME7 567 aaPredicted RBP19.91■□□□□ 0.78
SHANK1-203ENST00000391813 RNF157Q96PX1 679 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 MECRQ9BV79 373 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 PDGFCQ9NRA1 345 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 SAGE2PA6NJ88 616 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 EPHA3P29320 983 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 CCNG1P51959 295 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 ARPC4P59998 168 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 PTAR1Q7Z6K3 402 aaPredicted RBP19.91■□□□□ 0.78
SHANK1-203ENST00000391813 ANKRD23Q86SG2 305 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 LZTR1Q8N653 840 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 L3MBTL3Q96JM7 780 aaPredicted RBP19.91■□□□□ 0.78
SHANK1-203ENST00000391813 CLPTM1LQ96KA5 538 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 SPATA17Q96L03 361 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 CCDC182A6NF36 153 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 WTIPA6NIX2 430 aaPredicted RBP19.91■□□□□ 0.78
SHANK1-203ENST00000391813 TPH1P17752 444 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 AXLP30530 894 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 GTF2BQ00403 316 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 ZIK1Q3SY52 487 aaPredicted RBP19.91■□□□□ 0.78
SHANK1-203ENST00000391813 PGAM4Q8N0Y7 254 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 UCMAQ8WVF2 138 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 CINPQ9BW66 212 aaPredicted RBP19.91■□□□□ 0.78
SHANK1-203ENST00000391813 TRIM8Q9BZR9 551 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 CLPBQ9H078 707 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 DNAJC28Q9NX36 388 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 UBP1Q9NZI7 540 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 MORF4L1Q9UBU8 362 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 DSEQ9UL01 958 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 HADHBP55084 474 aaKnown RBP19.91■□□□□ 0.78
SHANK1-203ENST00000391813 RPL26P61254 145 aaKnown RBP19.91■□□□□ 0.78
SHANK1-203ENST00000391813 NOMO3P69849 1222 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 ATP13A4Q4VNC1 1196 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 CASP12Q6UXS9 341 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 UNC5AQ6ZN44 842 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 PSTKQ8IV42 348 aaKnown RBP19.91■□□□□ 0.78
SHANK1-203ENST00000391813 CYP2W1Q8TAV3 490 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 MYDGFQ969H8 173 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 YME1L1Q96TA2 773 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 HOPXQ9BPY8 73 aaPredicted RBP19.91■□□□□ 0.78
SHANK1-203ENST00000391813 ACTR8Q9H981 624 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 CDHR5Q9HBB8 845 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 MBD2Q9UBB5 411 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 FETUBQ9UGM5 382 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 COQ6Q9Y2Z9 468 aa19.91■□□□□ 0.78
SHANK1-203ENST00000391813 SLC26A3P40879 764 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 RAP1GAPP47736 663 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 SLC6A3Q01959 620 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 PTP4A2Q12974 167 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 DGKKQ5KSL6 1271 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 APTXQ7Z2E3 356 aaKnown RBP19.9■□□□□ 0.78
SHANK1-203ENST00000391813 SATL1Q86VE3 508 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 ZNF410Q86VK4 478 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 VSIG10LQ86VR7 867 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 NKD2Q969F2 451 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms