RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 SFR1Q86XK3 245 aa1.44□□□□□ -2.18
RNU6-239P-201ENST00000390990 ZNF689Q96CS4 500 aaPredicted RBP1.44□□□□□ -2.18
RNU6-239P-201ENST00000390990 C17orf77Q96MU5 243 aa1.44□□□□□ -2.18
RNU6-239P-201ENST00000390990 CSF3RQ99062 836 aa1.44□□□□□ -2.18
RNU6-239P-201ENST00000390990 MAGEB5Q9BZ81 275 aa1.44□□□□□ -2.18
RNU6-239P-201ENST00000390990 EPS8L2Q9H6S3 715 aa1.44□□□□□ -2.18
RNU6-239P-201ENST00000390990 TMEM51Q9NW97 253 aa1.44□□□□□ -2.18
RNU6-239P-201ENST00000390990 ZNF224Q9NZL3 707 aa1.44□□□□□ -2.18
RNU6-239P-201ENST00000390990 TRPC5Q9UL62 973 aaPredicted RBP1.44□□□□□ -2.18
RNU6-239P-201ENST00000390990 KCNS2Q9ULS6 477 aa1.44□□□□□ -2.18
RNU6-239P-201ENST00000390990 CNTN6Q9UQ52 1028 aa1.44□□□□□ -2.18
RNU6-239P-201ENST00000390990 COL5A2P05997 1499 aaPredicted RBP1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 COL4A4P53420 1690 aaPredicted RBP1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 PNMA6EA0A0J9YXQ4 647 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 A0A1W2PS18 150 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 hDV102S1A0JD36 115 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 CPED1A4D0V7 1026 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 A8MU10 97 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 CAPN9O14815 690 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 VNN2O95498 520 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 MMP3P08254 477 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 GYS1P13807 737 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 HOXB9P17482 250 aaPredicted RBP1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 EGR1P18146 543 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 CD53P19397 219 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 GABRB3P28472 473 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 CLCNKBP51801 687 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 PIN1Q13526 163 aaPredicted RBP1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 RNF187Q5TA31 235 aaPredicted RBP1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 KLHDC7AQ5VTJ3 777 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 NFE4Q86UQ8 179 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 AADATQ8N5Z0 425 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 ATP11CQ8NB49 1132 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 FAM156AQ8NDB6 213 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 SLC24A4Q8NFF2 622 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 SPATA22Q8NHS9 363 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 HDAC7Q8WUI4 952 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 C3orf30Q96M34 536 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 HERPUD2Q9BSE4 406 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 FSD1Q9BTV5 496 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 DDX23Q9BUQ8 820 aaKnown RBP1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 WDR13Q9H1Z4 485 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 PDZD7Q9H5P4 517 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 HOMER2Q9NSB8 354 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 PRR34Q9NV39 138 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 SIX4Q9UIU6 781 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 ZBTB1Q9Y2K1 713 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 SNX9Q9Y5X1 595 aa1.43□□□□□ -2.18
RNU6-239P-201ENST00000390990 RHPN2P1A8MT19 583 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 GOLIM4O00461 696 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 NR5A2O00482 541 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 MGEA5O60502 916 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 GAGE7O76087 117 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 SORBS2O94875 1100 aaKnown RBP1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 NDST3O95803 873 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 GAGE12FP0CL80 117 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 GAGE12GP0CL81 117 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 GAGE12IP0CL82 117 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 FCGR2AP12318 317 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 PEX2P28328 305 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 DCTDP32321 178 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 DPP6P42658 865 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 LIFRP42702 1097 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 MCL1Q07820 350 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 GAGE1Q13065 139 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 GAGE4Q13068 117 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 TNFAIP1Q13829 316 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 GRM4Q14833 912 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 KIAA0753Q2KHM9 967 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 TCTE1Q5JU00 501 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 CCDC149Q6ZUS6 474 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 RNF144BQ7Z419 303 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 TTC30AQ86WT1 665 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 RASGRP3Q8IV61 690 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 FBXL16Q8N461 479 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 AMER3Q8N944 861 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 CNBD1Q8NA66 436 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 CCDC150Q8NCX0 1101 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 FAR1Q8WVX9 515 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 TANKQ92844 425 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 SNX27Q96L92 541 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 HDHD5Q9BXW7 423 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 TRIM15Q9C019 465 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 ABCF3Q9NUQ8 709 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 VDAC3Q9Y277 283 aa1.42□□□□□ -2.18
RNU6-239P-201ENST00000390990 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
RNU6-239P-201ENST00000390990 TBC1D3DA0A087WVF3 549 aa1.41□□□□□ -2.18
RNU6-239P-201ENST00000390990 TBC1D3IA0A087WXS9 549 aa1.41□□□□□ -2.18
RNU6-239P-201ENST00000390990 TBC1D3EA0A087X179 549 aa1.41□□□□□ -2.18
RNU6-239P-201ENST00000390990 TBC1D3KA0A087X1G2 549 aa1.41□□□□□ -2.18
RNU6-239P-201ENST00000390990 C11orf97A0A1B0GVM6 126 aaPredicted RBP1.41□□□□□ -2.18
RNU6-239P-201ENST00000390990 MEIOCA2RUB1 952 aa1.41□□□□□ -2.18
RNU6-239P-201ENST00000390990 TBC1D3BA6NDS4 549 aa1.41□□□□□ -2.18
RNU6-239P-201ENST00000390990 TBC1D3FA6NER0 549 aaPredicted RBP1.41□□□□□ -2.18
RNU6-239P-201ENST00000390990 TBC1D3LB9A6J9 549 aa1.41□□□□□ -2.18
RNU6-239P-201ENST00000390990 CHL1O00533 1208 aa1.41□□□□□ -2.18
RNU6-239P-201ENST00000390990 MID1O15344 667 aa1.41□□□□□ -2.18
RNU6-239P-201ENST00000390990 ZNF821O75541 412 aaPredicted RBP1.41□□□□□ -2.18
RNU6-239P-201ENST00000390990 DDAH2O95865 285 aa1.41□□□□□ -2.18
RNU6-239P-201ENST00000390990 HLA-DQA2P01906 255 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms