RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 KBTBD12Q3ZCT8 623 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 TRMT10BQ6PF06 316 aaKnown RBP12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 LINGO4Q6UY18 593 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 SETD3Q86TU7 594 aaPredicted RBP12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 FAM217AQ8IXS0 508 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 TEX26Q8N6G2 289 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 ST13P5Q8NFI4 369 aaPredicted RBP12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 SMG7Q92540 1137 aaKnown RBP12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 LRRC39Q96DD0 335 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 STAMBPL1Q96FJ0 436 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 TBL1YQ9BQ87 522 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 ACSS3Q9H6R3 686 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 LRRC40Q9H9A6 602 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 CASS4Q9NQ75 786 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 TDP1Q9NUW8 608 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 IL1RAPL1Q9NZN1 696 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 MRPS23Q9Y3D9 190 aaKnown RBP12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 CCDC78A2IDD5 438 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 ERI2A8K979 691 aaKnown RBP12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 KDELR3O43731 214 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 ANXA9O76027 345 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 LUC7L3O95232 432 aaKnown RBP12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 FGF19O95750 216 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 MMP2P08253 660 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 CREB1P16220 341 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 CORO7P57737 925 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 GUCY1A3Q02108 690 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 CDH18Q13634 790 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 RAB30Q15771 203 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 TMCO4Q5TGY1 634 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 TTC39BQ5VTQ0 682 aaPredicted RBP12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 CCDC91Q7Z6B0 441 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 RNF135Q8IUD6 432 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 FATE1Q969F0 183 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 MRGPRX2Q96LB1 330 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 SLC25A51Q9H1U9 297 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 SMYD2Q9NRG4 433 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 EURLQ9NYK6 297 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 AAR2Q9Y312 384 aaKnown RBP12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 TYW5A2RUC4 315 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 CXorf49A8MYA2 514 aaPredicted RBP12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 CDH16O75309 829 aa12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 C1QAP02745 245 aa12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 CSKP41240 450 aa12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 CHRNA4P43681 627 aa12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 IFNAR2P48551 515 aa12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 GEMP55040 296 aa12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 ZNF235Q14590 738 aa12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 TNFAIP8L3Q5GJ75 292 aa12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 NAPEPLDQ6IQ20 393 aa12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 ARID3BQ8IVW6 561 aaPredicted RBP12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 MFN1Q8IWA4 741 aa12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 KLHDC8BQ8IXV7 354 aa12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 IMP4Q96G21 291 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 EXOC2Q96KP1 924 aa12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 PAFAH2Q99487 392 aa12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 ACE2Q9BYF1 805 aaPredicted RBP12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 LINC00597Q9H2U6 94 aa12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 RETREG1Q9H6L5 497 aa12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 VPS28Q9UK41 221 aa12.38□□□□□ -0.43
SPTBN1-203ENST00000389980 UGT1A9O60656 530 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 SHOX2O60902 331 aaPredicted RBP12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 FAM155BO75949 473 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 PFKLP17858 780 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 DDX6P26196 483 aaKnown RBP eCLIP12.37□□□□□ -0.435e-6■■■■■ 46.6
SPTBN1-203ENST00000389980 ADRA1AP35348 466 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 WNT3AP56704 352 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 GEMIN4P57678 1058 aaKnown RBP12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 ARF5P84085 180 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 DENND5AQ6IQ26 1287 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 KDELC1Q6UW63 502 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 KDM7AQ6ZMT4 941 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 CROCCP2Q86T23 111 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 EXOC3L1Q86VI1 746 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 APCDD1Q8J025 514 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 CPXM2Q8N436 756 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 GSDMBQ8TAX9 411 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 ARRDC2Q8TBH0 407 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 SEMA3CQ99985 751 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 TACO1Q9BSH4 297 aaKnown RBP12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 FEM1AQ9BSK4 669 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 FSD1LQ9BXM9 530 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 UGT1A7Q9HAW7 530 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 UGT1A10Q9HAW8 530 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 UGT1A8Q9HAW9 530 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 BFARQ9NZS9 450 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 SLC17A6Q9P2U8 582 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 UBA2Q9UBT2 640 aaPredicted RBP12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 DPP7Q9UHL4 492 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 ZNF510Q9Y2H8 683 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 ANKRD36A6QL64 1941 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 E2F8A0AVK6 867 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 CD160O95971 181 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 TSHRP16473 764 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 RGRP47804 291 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 SKOR1P84550 965 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 CDH17Q12864 832 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 RARS2Q5T160 578 aaKnown RBP12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 TMEM25Q86YD3 366 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 CTAGE3PQ8IX95 158 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms