RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 LRRC14Q15048 493 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 RALGPS1Q5JS13 557 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 CERCAMQ5T4B2 595 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 TEDDM1Q5T9Z0 273 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 PDE12Q6L8Q7 609 aaKnown RBP13.77□□□□□ -0.21
SEC13-203ENST00000383801 LVRNQ6Q4G3 990 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 KYAT3Q6YP21 454 aaKnown RBP13.77□□□□□ -0.21
SEC13-203ENST00000383801 HTR3DQ70Z44 454 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 CNTN4Q8IWV2 1026 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 CPXM2Q8N436 756 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 MRPL43Q8N983 215 aaKnown RBP13.77□□□□□ -0.21
SEC13-203ENST00000383801 LEMD2Q8NC56 503 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 CCDC197Q8NCU1 140 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 IPMKQ8NFU5 416 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 SPATA22Q8NHS9 363 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 MGARPQ8TDB4 240 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 LRRC8CQ8TDW0 803 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 BADQ92934 168 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 ZNF669Q96BR6 464 aaPredicted RBP13.77□□□□□ -0.21
SEC13-203ENST00000383801 PABPC5Q96DU9 382 aaKnown RBP13.77□□□□□ -0.21
SEC13-203ENST00000383801 SERAC1Q96JX3 654 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 GCNAQ96QF7 691 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 PSKH2Q96QS6 385 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 KIF9Q9HAQ2 790 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 NT5MQ9NPB1 228 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 SEPT3Q9UH03 358 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 DPP7Q9UHL4 492 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 RIMKLBQ9ULI2 386 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 GRID1Q9ULK0 1009 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 PLLPQ9Y342 182 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 STARD13Q9Y3M8 1113 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 PLXNA4Q9HCM2 1894 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 C2orf78A6NCI8 922 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 C5orf67F2Z3F1 127 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 F5H423 210 aaPredicted RBP13.76□□□□□ -0.21
SEC13-203ENST00000383801 GFRA2O00451 464 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 KLF11O14901 512 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 SNX3O60493 162 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 USP12O75317 370 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 GSTA1P08263 222 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 ITGA2BP08514 1039 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 HLA-DPA1P20036 260 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 TAC1P20366 129 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 HOXA9P31269 272 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 ETV4P43268 484 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 CRADDP78560 199 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 SMAD3P84022 425 aaKnown RBP13.76□□□□□ -0.21
SEC13-203ENST00000383801 ZNF235Q14590 738 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 INO80DQ53TQ3 878 aaPredicted RBP13.76□□□□□ -0.21
SEC13-203ENST00000383801 C6orf89Q6UWU4 347 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 Q6ZNB5 142 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 KIAA0408Q6ZU52 694 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 GALNT7Q86SF2 657 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 METTL3Q86U44 580 aaKnown RBP13.76□□□□□ -0.21
SEC13-203ENST00000383801 KCNMB4Q86W47 210 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 RASSF3Q86WH2 238 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 ZNF354CQ86Y25 554 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 HJURPQ8NCD3 748 aaPredicted RBP13.76□□□□□ -0.21
SEC13-203ENST00000383801 KREMEN2Q8NCW0 462 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 ARRDC2Q8TBH0 407 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 CALML6Q8TD86 181 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 FEM1CQ96JP0 617 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 ZFRQ96KR1 1074 aaKnown RBP13.76□□□□□ -0.21
SEC13-203ENST00000383801 FCRL3Q96P31 734 aaPredicted RBP13.76□□□□□ -0.21
SEC13-203ENST00000383801 RBBP8Q99708 897 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 MGME1Q9BQP7 344 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 FICDQ9BVA6 458 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 LRRC3Q9BY71 257 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 PITPNM3Q9BZ71 974 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 CHRAC1Q9NRG0 131 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 UBP1Q9NZI7 540 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 TCAF1Q9Y4C2 921 aa13.76□□□□□ -0.21
SEC13-203ENST00000383801 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.75□□□□□ -0.21
SEC13-203ENST00000383801 FOXO6A8MYZ6 492 aa13.75□□□□□ -0.21
SEC13-203ENST00000383801 BIRC5O15392 142 aa13.75□□□□□ -0.21
SEC13-203ENST00000383801 TLL1O43897 1013 aa13.75□□□□□ -0.21
SEC13-203ENST00000383801 GLUD1P00367 558 aa13.75□□□□□ -0.21
SEC13-203ENST00000383801 MPOP05164 745 aa13.75□□□□□ -0.21
SEC13-203ENST00000383801 RHOCP08134 193 aa13.75□□□□□ -0.21
SEC13-203ENST00000383801 SERPINF2P08697 491 aa13.75□□□□□ -0.21
SEC13-203ENST00000383801 SERPINH1P50454 418 aaKnown RBP13.75□□□□□ -0.21
SEC13-203ENST00000383801 LIMK2P53671 638 aa13.75□□□□□ -0.21
SEC13-203ENST00000383801 ITKQ08881 620 aa13.75□□□□□ -0.21
SEC13-203ENST00000383801 NSUN2Q08J23 767 aaKnown RBP eCLIP13.75□□□□□ -0.21
SEC13-203ENST00000383801 SLC1A5Q15758 541 aa13.75□□□□□ -0.21
SEC13-203ENST00000383801 IL31Q6EBC2 164 aa13.75□□□□□ -0.21
SEC13-203ENST00000383801 KIAA0930Q6ICG6 404 aaPredicted RBP13.75□□□□□ -0.21
SEC13-203ENST00000383801 SCG3Q8WXD2 468 aaKnown RBP13.75□□□□□ -0.21
SEC13-203ENST00000383801 SPOCK2Q92563 424 aa13.75□□□□□ -0.21
SEC13-203ENST00000383801 MFSD3Q96ES6 412 aa13.75□□□□□ -0.21
SEC13-203ENST00000383801 ZNF419Q96HQ0 510 aaPredicted RBP13.75□□□□□ -0.21
SEC13-203ENST00000383801 SAMD11Q96NU1 681 aa13.75□□□□□ -0.21
SEC13-203ENST00000383801 GKN1Q9NS71 199 aa13.75□□□□□ -0.21
SEC13-203ENST00000383801 UBA2Q9UBT2 640 aaPredicted RBP13.75□□□□□ -0.21
SEC13-203ENST00000383801 DENND4CQ5VZ89 1909 aa13.75□□□□□ -0.21
SEC13-203ENST00000383801 MTCL1Q9Y4B5 1905 aaKnown RBP13.75□□□□□ -0.21
SEC13-203ENST00000383801 KIAA0100Q14667 2235 aaKnown RBP13.75□□□□□ -0.21
SEC13-203ENST00000383801 HMX2A2RU54 273 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 GLRA3O75311 464 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 PMPCBO75439 489 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms